3U12 | pdb_00003u12

The pleckstrin homology (PH) domain of USP37

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	PH domain-like	8092496	3000134	SCOP2B (2022-06-29)
A	SCOP2 Family	USP37 N-terminal domain-like	8045969	4004789	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PH domain-like	8092496	3000134	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	UCH_N	e3u12B1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: UCH_N	ECOD (v294.1)
A	MGS	e3u12A1	A: a/b three-layered sandwiches	X: Baculovirus p35 protein-related	H: Bet v1-like	T: Bet v1-like	F: MGS	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.30.29.180	Mainly Beta	Roll	PH-domain like	Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain	CATH (4.3.0)
A	2.30.29.180	Mainly Beta	Roll	PH-domain like	Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF16674	N-terminal of ubiquitin carboxyl-terminal hydrolase 37 (UCH_N)	N-terminal of ubiquitin carboxyl-terminal hydrolase 37	UCH_N is a domain found at the N-terminus of ubiquitin carboxyl-terminal hydrolase 37 or 26. The function is not known.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	USP37 protein	cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity protein binding binding kinase binding enzyme binding protein kinase binding cysteine-type endopeptidase activity cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity protein binding binding kinase binding enzyme binding protein kinase binding cysteine-type endopeptidase activity endopeptidase activity	regulation of protein stability biological regulation regulation of biological quality protein deubiquitination primary metabolic process protein K11-linked deubiquitination protein modification by small protein removal macromolecule modification metabolic process cellular process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process regulation of protein stability biological regulation regulation of biological quality protein deubiquitination primary metabolic process protein K11-linked deubiquitination protein modification by small protein removal macromolecule modification metabolic process cellular process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation or removal protein K48-linked deubiquitination mitotic cell cycle process cell cycle phase transition cell cycle G1/S transition of mitotic cell cycle cell cycle G1/S phase transition mitotic cell cycle mitotic cell cycle phase transition cell cycle process cell division regulation of biological process regulation of cellular process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process DNA replication regulation of nucleobase-containing compound metabolic process regulation of metabolic process regulation of DNA replication regulation of DNA metabolic process proteolysis	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR038093	Ubiquitin carboxyl-terminal hydrolase 37, pleckstrin homology-like domain superfamily	Homologous Superfamily
A, B	IPR032069	Ubiquitin carboxyl-terminal hydrolase 37, pleckstrin homology-like domain	Domain
A, B	IPR050164	Ubiquitin carboxyl-terminal hydrolases	Family
A, B	IPR028889	Ubiquitin specific protease UPS, catalytic domain	Domain
A, B	IPR018200	Ubiquitin specific protease, conserved site	Conserved Site
A, B	IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Domain
A, B	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
A, B	IPR003903	Ubiquitin interacting motif	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q86T82	atypical teratoid rhabdoid tumor ovarian cancer large cell medulloblastoma tuberculosis osteosarcoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.