3TS3 | pdb_00003ts3

Crystal structure of the projection domain of the turkey astrovirus capsid protein at 1.5 angstrom resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyNorovirus P2 domain-like 8093106 3002678 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNorovirus P2 domain-like 8093106 3002678 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNorovirus P2 domain-like 8093106 3002678 SCOP2B (2022-06-29)
ASCOP2 FamilyAstrovirus capsid protein spike P2 domain-like 8093105 4005602 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNorovirus P2 domain-like 8093106 3002678 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DIon_trans_2e3ts3D1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Ion_trans_2ECOD (develop294)
CIon_trans_2e3ts3C1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Ion_trans_2ECOD (develop294)
BIon_trans_2e3ts3B1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Ion_trans_2ECOD (develop294)
AAstro_capsid_p2e3ts3A1 A: alpha bundlesX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsH: SH3T: SH3F: Astro_capsid_p2ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Capsid polyprotein-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR004337Astrovirus capsid protein, inner core domainDomain
A, B, C, D
IPR029053Viral coat protein subunitHomologous Superfamily
A, B, C, D
IPR032268Capsid polyprotein VP90, C-terminalDomain