3TOW | pdb_00003tow

Crystal Structure of the MABP Domain of MVB12B of Human ESCRT-I Complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMACPF/MABP domain-like 8051726 4007486 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyMACPF/MABP domain-like 8052004 3002079 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADUF2464e3towA1 A: beta duplicates or obligate multimersX: Multivesicular body subunit 12B MABP domain (From Topology)H: Multivesicular body subunit 12B MABP domain (From Topology)T: Multivesicular body subunit 12B MABP domainF: DUF2464ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.100.10.50 Mainly Beta Aligned Prism Vitelline Membrane Outer Layer Protein I, subunit A CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF10240MABP domain (MABP)MABP domainThis domain is found in the N-terminal region of MVB12 proteins, which are subunits of the ESCRT-I complex involved in multivesicular body formation. The MABP domain adopts a type-I beta-prism fold with internal three-fold symmetry, consisting of thr ...This domain is found in the N-terminal region of MVB12 proteins, which are subunits of the ESCRT-I complex involved in multivesicular body formation. The MABP domain adopts a type-I beta-prism fold with internal three-fold symmetry, consisting of three homologous segments each forming a three-stranded beta-sheet. It is found in diverse proteins including vertebrate DENND4A/B/C, Drosophila Crag, and bacterial MACPF-like proteins. The domain is believed to function as a membrane-associated adaptor that links other domains to vesicular membranes during intracellular trafficking. Most eukaryotic versions contain conserved cysteine residues in the first and third subdomains [4,5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Multivesicular body subunit 12B

InterPro: Protein Family Classification InterPro Database Homepage