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 3T7Z | pdb_00003t7z

Structure of Methanocaldococcus jannaschii Nop N-terminal domain

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANurAe3t7zA1 A: alpha arraysX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: NurAECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.420.220 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF21667Nop5, N-terminal domain (Nop5_N)Nop5, N-terminal domainThis entry represents the N-terminal domain of archaeal Nop5, a Nop56/58 homologue which are pre-RNA processing ribonucleoproteins (RNP). This domain is very well conserved and mediates a stable interaction with fibrillarin, playing a role in both RN ...This entry represents the N-terminal domain of archaeal Nop5, a Nop56/58 homologue which are pre-RNA processing ribonucleoproteins (RNP). This domain is very well conserved and mediates a stable interaction with fibrillarin, playing a role in both RNP assembly and methyltransferase activity [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Nucleolar protein Nop 56/58 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR042239Nop, C-terminal domainHomologous Superfamily
IPR036070Nop domain superfamilyHomologous Superfamily
IPR045056Nucleolar protein Nop56/Nop58Family
IPR048895MJ0694-like, N-terminal domainDomain
IPR002687Nop domainDomain
IPR029012Helix hairpin bin domain superfamilyHomologous Superfamily
IPR012976NOSICDomain
IPR047099Nop5, N-terminal domain superfamilyHomologous Superfamily