3T72
PhoB(E)-Sigma70(4)-(RNAP-Betha-flap-tip-helix)-DNA Transcription Activation Sub-Complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
CA [auth 4] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
DA [auth 5] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
GA [auth 8] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
HA [auth 9] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
KA [auth c] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
LA [auth d] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
OA [auth g] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
PA [auth h] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
Q [auth R] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
R [auth S] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
SA [auth k] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
TA [auth l] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
U [auth V] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
V [auth W] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
Y [auth Z] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
Z [auth 1] | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8039254 | 3001179 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00486 | e3t72A1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
B | PF00486 | e3t72B1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
CA [auth 4] | PF00486 | e3t7241 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
DA [auth 5] | PF00486 | e3t7251 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
E | PF00486 | e3t72E1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
F | PF00486 | e3t72F1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
GA [auth 8] | PF00486 | e3t7281 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
HA [auth 9] | PF00486 | e3t7291 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
I | PF00486 | e3t72I1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
J | PF00486 | e3t72J1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
KA [auth c] | PF00486 | e3t72c1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
LA [auth d] | PF00486 | e3t72d1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
M | PF00486 | e3t72M1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
N | PF00486 | e3t72N1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
OA [auth g] | PF00486 | e3t72g1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
PA [auth h] | PF00486 | e3t72h1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
Q [auth R] | PF00486 | e3t72R1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
R [auth S] | PF00486 | e3t72S1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
SA [auth k] | PF00486 | e3t72k1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
TA [auth l] | PF00486 | e3t72l1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
U [auth V] | PF00486 | e3t72V1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
V [auth W] | PF00486 | e3t72W1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
Y [auth Z] | PF00486 | e3t72Z1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
Z [auth 1] | PF00486 | e3t7211 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
WA [auth o] | PF04545 | e3t72o1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF04545 | ECOD (1.6) |
XA [auth q] | PF04545 | e3t72q1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF04545 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00486 | Transcriptional regulatory protein, C terminal (Trans_reg_C) | Transcriptional regulatory protein, C terminal | - | Domain | |
WA [auth o], XA [auth q] | PF04539 | Sigma-70 region 3 (Sigma70_r3) | Sigma-70 region 3 | - | Family |
WA [auth o], XA [auth q] | PF00562 | RNA polymerase Rpb2, domain 6 (RNA_pol_Rpb2_6) | RNA polymerase Rpb2, domain 6 | RNA polymerases catalyse the DNA dependent polymerisation of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). This domain represents the hybrid binding domain ... | Domain |
WA [auth o], XA [auth q] | PF04545 | Sigma-70, region 4 (Sigma70_r4) | Sigma-70, region 4 | Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif [1]. Due to the way Pfam works, the threshold has been set artificially high to prevent overlaps with other helix-turn-helix fami ... | Domain |