Dimerization domain of Vibrio parahemolyticus VopL
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | EUF08247 | e3rylB1 | A: alpha complex topology | X: VopL dimerization domain (From Topology) | H: VopL dimerization domain (From Topology) | T: VopL dimerization domain | F: EUF08247 | ECOD (1.6) |
| A | EUF08247 | e3rylA1 | A: alpha complex topology | X: VopL dimerization domain (From Topology) | H: VopL dimerization domain (From Topology) | T: VopL dimerization domain | F: EUF08247 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.20.120.1210 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
| B | 1.10.720.170 | Mainly Alpha | Orthogonal Bundle | Transcription Termination Factor Rho, Rna-binding Domain | Chain A, Domain 1 | CATH (4.3.0) |
| A | 1.20.120.1210 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
| A | 1.10.720.170 | Mainly Alpha | Orthogonal Bundle | Transcription Termination Factor Rho, Rna-binding Domain | Chain A, Domain 1 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| protein VPA1370 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR049414 | VopL, C-terminal dimerization domain | Domain | |
| IPR003124 | WH2 domain | Domain | |
| IPR049415 | VopL, C-terminal dimerization domain superfamily | Homologous Superfamily |
