Crystal structure of ABC sugar transporter (periplasmic sugar binding protein) from Legionella pneumophila
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d3rotb_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Legionella pneumophila subsp. pneumophila str. Philadelphia 1 ) [TaxId: 272624 ], | SCOPe (2.08) |
| A | d3rota_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Legionella pneumophila subsp. pneumophila str. Philadelphia 1 ) [TaxId: 272624 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | ChapFlgA | e3rotB1 | A: a/b three-layered sandwiches | X: Thioredoxin-like | H: Thioredoxin-like | T: Thioredoxin-like | F: ChapFlgA | ECOD (v294.1) |
| A | Ribonuc_L-PSP | e3rotA3 | A: a/b three-layered sandwiches | X: Fusion glycoprotein F2 | H: HTH | T: winged helix domain | F: Ribonuc_L-PSP | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
| A | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13407 | Periplasmic binding protein domain (Peripla_BP_4) | Periplasmic binding protein domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| ABC sugar transporter, periplasmic sugar binding protein |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR025997 | Periplasmic binding protein | Domain | |
| IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily |
