3QI0

Structural, thermodynamic and kinetic analysis of the picomolar binding affinity interaction of the beta-lactamase inhibitor protein-II (BLIP-II) with class A beta-lactamases

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d3qi0b_	All beta proteins	7-bladed beta-propeller	RCC1/BLIP-II	beta-lactamase inhibitor protein-II, BLIP-II	automated matches	Streptomyces hydrogenans (Streptomyces exfoliatus ) [TaxId: 1905 ],	SCOPe (2.08)
D	d3qi0d_	All beta proteins	7-bladed beta-propeller	RCC1/BLIP-II	beta-lactamase inhibitor protein-II, BLIP-II	automated matches	Streptomyces hydrogenans (Streptomyces exfoliatus ) [TaxId: 1905 ],	SCOPe (2.08)
E	d3qi0e_	All beta proteins	7-bladed beta-propeller	RCC1/BLIP-II	beta-lactamase inhibitor protein-II, BLIP-II	automated matches	Streptomyces hydrogenans (Streptomyces exfoliatus ) [TaxId: 1905 ],	SCOPe (2.08)
F	d3qi0f_	All beta proteins	7-bladed beta-propeller	RCC1/BLIP-II	beta-lactamase inhibitor protein-II, BLIP-II	automated matches	Streptomyces hydrogenans (Streptomyces exfoliatus ) [TaxId: 1905 ],	SCOPe (2.08)
A	d3qi0a_	All beta proteins	7-bladed beta-propeller	RCC1/BLIP-II	beta-lactamase inhibitor protein-II, BLIP-II	automated matches	Streptomyces hydrogenans (Streptomyces exfoliatus ) [TaxId: 1905 ],	SCOPe (2.08)
C	d3qi0c_	All beta proteins	7-bladed beta-propeller	RCC1/BLIP-II	beta-lactamase inhibitor protein-II, BLIP-II	automated matches	Streptomyces hydrogenans (Streptomyces exfoliatus ) [TaxId: 1905 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	RCC1/BLIP-II	8037361	3001704	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	RCC1/BLIP-II	8037361	3001704	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	RCC1/BLIP-II	8037361	3001704	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	RCC1/BLIP-II	8037361	3001704	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	RCC1/BLIP-II	8037361	3001704	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RCC1/BLIP-II	8037361	3001704	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PF13540	e3qi0B1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF13540	ECOD (1.6)
D	PF13540	e3qi0D1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF13540	ECOD (1.6)
E	PF13540	e3qi0E1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF13540	ECOD (1.6)
F	PF13540	e3qi0F1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF13540	ECOD (1.6)
A	PF13540	e3qi0A1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF13540	ECOD (1.6)
C	PF13540	e3qi0C1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: PF13540	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.130.10.30	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)
D	2.130.10.30	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)
E	2.130.10.30	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)
F	2.130.10.30	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)
A	2.130.10.30	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)
C	2.130.10.30	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF13540	Regulator of chromosome condensation (RCC1) repeat (RCC1_2)	Regulator of chromosome condensation (RCC1) repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Beta-lactamase inhibitory protein II	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR000408	Regulator of chromosome condensation, RCC1	Repeat
A, B, C, D, E A, B, C, D, E, F	IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.