3OJA
Crystal structure of LRIM1/APL1C complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e3ojaA1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF20733 | e3ojaA2 | A: alpha duplicates or obligate multimers | X: HLH-like | H: Dimerization domain in LRIM1/APL1C (From Topology) | T: Dimerization domain in LRIM1/APL1C | F: PF20733 | ECOD (1.6) |
B | PF13855 | e3ojaB1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF13855 | ECOD (1.6) |
B | PF20733 | e3ojaB2 | A: alpha duplicates or obligate multimers | X: HLH-like | H: Dimerization domain in LRIM1/APL1C (From Topology) | T: Dimerization domain in LRIM1/APL1C | F: PF20733 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (4.3.0) |
A | 6.10.280.140 | Special | Helix non-globular | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
A | 1.20.5.4090 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (4.3.0) |
B | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 1.20.5.340 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00560 | Leucine Rich Repeat (LRR_1) | Leucine Rich Repeat | - | Repeat | |
PF20733 | Dimerization domain in LRIM1 (LRIM1_dimer) | Dimerization domain in LRIM1 | - | Coiled-coil | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Leucine-rich Immune Molecule 1 | - |
| ||
Anopheles Plasmodium-responsive Leucine-rich repeat protein 1 | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR048481 | LRIM1/APL1C-like, dimerization domain | Domain | |
IPR001611 | Leucine-rich repeat | Repeat |