Structure of YahD with Malic acid
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d3og9b_ | Alpha and beta proteins (a/b) | alpha/beta-Hydrolases | alpha/beta-Hydrolases | automated matches | automated matches | Streptococcus lactis (Lactococcus lactis subsp. lactis Il1403 ) [TaxId: 272623 ], | SCOPe (2.08) |
| A | d3og9a_ | Alpha and beta proteins (a/b) | alpha/beta-Hydrolases | alpha/beta-Hydrolases | automated matches | automated matches | Streptococcus lactis (Lactococcus lactis subsp. lactis Il1403 ) [TaxId: 272623 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | alpha/beta-Hydrolases | 8060293 | 3000102 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Carboxylesterase/thioesterase 1 | 8060292 | 4000719 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | alpha/beta-Hydrolases | 8060293 | 3000102 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | FAD_binding_4 | e3og9B1 | A: alpha bundles | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: FAD_binding_4 | ECOD (develop294) |
| A | CbiX | e3og9A1 | A: alpha bundles | X: N-terminal beta-sandwich domain in anthrax protective antigen | H: Macro domain-like | T: Macro domain-like | F: CbiX | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (4.3.0) |
| A | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01738 | Dienelactone hydrolase family (DLH) | Dienelactone hydrolase family | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| protein yahD a copper inducible hydrolase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR002925 | Dienelactone hydrolase | Domain | |
| IPR029058 | Alpha/Beta hydrolase fold | Homologous Superfamily |
