Structure of the Shewanella loihica PV-4 NADH-dependent persulfide reductase
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Sigma70_r2,Sigma70_ner | e3ntaB1 | A: alpha bundles | X: Lipocalins/Streptavidin | H: SAM/DNA-glycosylase | T: SAM domain-like | F: Sigma70_r2,Sigma70_ner | ECOD (develop294) |
| A | Sigma70_r2,Sigma70_ner | e3ntaA1 | A: alpha bundles | X: Lipocalins/Streptavidin | H: SAM/DNA-glycosylase | T: SAM domain-like | F: Sigma70_r2,Sigma70_ner | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.50.50.60 | Alpha Beta | 3-Layer(bba) Sandwich | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | CATH (4.3.0) |
| B | 3.40.250.10 | Alpha Beta | 3-Layer(aba) Sandwich | Oxidized Rhodanese | domain 1 | CATH (4.3.0) |
| A | 3.50.50.60 | Alpha Beta | 3-Layer(bba) Sandwich | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | CATH (4.3.0) |
| A | 3.40.250.10 | Alpha Beta | 3-Layer(aba) Sandwich | Oxidized Rhodanese | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07992 | Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox_2) | Pyridine nucleotide-disulphide oxidoreductase | This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain. | Domain | |
| PF00581 | Rhodanese-like domain (Rhodanese) | Rhodanese-like domain | Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. | Domain | |
| PF02852 | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (Pyr_redox_dim) | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| FAD-dependent pyridine nucleotide-disulphide oxidoreductase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR004099 | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | Domain | |
| IPR050260 | FAD-dependent oxidoreductase | Family | |
| IPR001763 | Rhodanese-like domain | Domain | |
| IPR036873 | Rhodanese-like domain superfamily | Homologous Superfamily | |
| IPR023753 | FAD/NAD(P)-binding domain | Domain | |
| IPR016156 | FAD/NAD-linked reductase, dimerisation domain superfamily | Homologous Superfamily | |
| IPR036188 | FAD/NAD(P)-binding domain superfamily | Homologous Superfamily |














