3NIC | pdb_00003nic

DNA binding and cleavage by the GIY-YIG endonuclease R.Eco29kI inactive variant Y49F

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
He3nicH1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Ge3nicG1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Fe3nicF1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Ee3nicE1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
De3nicD1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Ce3nicC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Be3nicB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Ae3nicA1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
J [auth N],
L [auth J],
N [auth L],
P		DNA (5'-D(P*GP*CP*GP*GP*CP*GP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*CP*TP*CP*CP*CP*G)-3')---
I [auth M],
K [auth I],
M [auth K],
O		DNA (5'-D(P*CP*GP*GP*GP*AP*GP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*CP*GP*CP*CP*GP*C)-3')---
A, B, C, D, E
Eco29kIR - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR018575Restriction endonuclease, type II, Eco29kI, GIY-YIG domainDomain