3NFD | pdb_00003nfd

Chronobacterium ammoniagenes ACPS-CoA complex

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3nfda_	Alpha and beta proteins (a+b)	4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	automated matches	automated matches	Brevibacterium ammoniagenes (Corynebacterium ammoniagenes ) [TaxId: 1697 ],	SCOPe (2.08)
B	d3nfdb_	Alpha and beta proteins (a+b)	4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	automated matches	automated matches	Brevibacterium ammoniagenes (Corynebacterium ammoniagenes ) [TaxId: 1697 ],	SCOPe (2.08)
E	d3nfde_	Alpha and beta proteins (a+b)	4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	automated matches	automated matches	Brevibacterium ammoniagenes (Corynebacterium ammoniagenes ) [TaxId: 1697 ],	SCOPe (2.08)
F	d3nfdf_	Alpha and beta proteins (a+b)	4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	automated matches	automated matches	Brevibacterium ammoniagenes (Corynebacterium ammoniagenes ) [TaxId: 1697 ],	SCOPe (2.08)
D	d3nfdd_	Alpha and beta proteins (a+b)	4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	automated matches	automated matches	Brevibacterium ammoniagenes (Corynebacterium ammoniagenes ) [TaxId: 1697 ],	SCOPe (2.08)
C	d3nfdc_	Alpha and beta proteins (a+b)	4'-phosphopantetheinyl transferase	4'-phosphopantetheinyl transferase	automated matches	automated matches	Brevibacterium ammoniagenes (Corynebacterium ammoniagenes ) [TaxId: 1697 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	4'-phosphopantetheinyl transferase	8098142	3000948	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	4'-phosphopantetheinyl transferase	8098142	3000948	SCOP2B (2022-06-29)
E	SCOP2 Family	Holo-(acyl carrier protein) synthase ACPS	8098141	4003652	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	4'-phosphopantetheinyl transferase	8098142	3000948	SCOP2 (2022-06-29)
F	SCOP2B Superfamily	4'-phosphopantetheinyl transferase	8098142	3000948	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	4'-phosphopantetheinyl transferase	8098142	3000948	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	4'-phosphopantetheinyl transferase	8098142	3000948	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Gal-bind_lectin	e3nfdA1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: Gal-bind_lectin	ECOD (develop294)
B	Gal-bind_lectin	e3nfdB1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: Gal-bind_lectin	ECOD (develop294)
E	Gal-bind_lectin	e3nfdE1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: Gal-bind_lectin	ECOD (develop294)
F	Gal-bind_lectin	e3nfdF1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: Gal-bind_lectin	ECOD (develop294)
D	Gal-bind_lectin	e3nfdD1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: Gal-bind_lectin	ECOD (develop294)
C	Gal-bind_lectin	e3nfdC1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: Gal-bind_lectin	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.90.470.20	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (4.3.0)
B	3.90.470.20	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (4.3.0)
E	3.90.470.20	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (4.3.0)
F	3.90.470.20	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (4.3.0)
D	3.90.470.20	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (4.3.0)
C	3.90.470.20	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Phosphopantetheine protein transferase, Ppt1p	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding holo-[acyl-carrier-protein] synthase activity transferase activity catalytic activity phosphotransferase activity, for other substituted phosphate groups transferase activity, transferring phosphorus-containing groups	fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process primary metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process lipid metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR037143	4'-phosphopantetheinyl transferase domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR002582	Holo-[acyl carrier protein] synthase	Family
A, B, C, D, E A, B, C, D, E, F	IPR004568	Phosphopantetheine-protein transferase domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR008278	4'-phosphopantetheinyl transferase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.