3MYV | pdb_00003myv

Crystal structure of a SusD superfamily protein (BVU_0732) from Bacteroides vulgatus ATCC 8482 at 1.80 A resolution

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPBPe3myvB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
ACol-Pyo_DNasee3myvA1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: DEATH domainT: DEATH domainF: Col-Pyo_DNaseECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.25.40.390 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
B2.20.20.130 Mainly Beta Single Sheet Anthopleurin-A CATH (4.3.0)
B1.25.40.900 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
A1.25.40.390 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
A2.20.20.130 Mainly Beta Single Sheet Anthopleurin-A CATH (4.3.0)
A1.25.40.900 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
SusD superfamily protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR012944RagB/SusD domainDomain
A, B
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
A, B
IPR033985SusD-like, N-terminalDomain

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B
OPMMonotopic/peripheralAll alpha monotopic/peripheralTetratrico peptide repeat superfamilySusD family