Crystal structure of metallo peptidase from Rhodobacter sphaeroides liganded with phosphinate mimic of dipeptide L-Ala-D-Ala
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Tachylectin | e3ly0B1 | A: alpha arrays | X: Alpha-beta plaits | H: Phage tail protein-like | T: Transmembrane protein 14A | F: Tachylectin | ECOD (v295.2) |
| A | CMD | e3ly0A1 | A: alpha arrays | X: Immunoglobulin-like beta-sandwich | H: sensor domains | T: sensor domains | F: CMD | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
| A | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01244 | Membrane dipeptidase (Peptidase family M19) (Peptidase_M19) | Membrane dipeptidase (Peptidase family M19) | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Dipeptidase AC. Metallo peptidase. MEROPS family M19 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR008257 | Peptidase M19 | Family | |
| IPR032466 | Metal-dependent hydrolase | Homologous Superfamily |
