3LCZ | pdb_00003lcz

B.licheniformis Anti-TRAP can assemble into two types of dodecameric particles with the same symmetry but inverted orientation of trimers

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2 Family	Anti-TRAP protein-like	8051691	4007474	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	DnaJ/Hsp40 cysteine-rich domain-like	8055692	3001550	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	DnaJ/Hsp40 cysteine-rich domain-like	8055692	3001550	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	DnaJ/Hsp40 cysteine-rich domain-like	8055692	3001550	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	DnaJ/Hsp40 cysteine-rich domain-like	8055692	3001550	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	RVP	e3lczD1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.1)
C	RVP	e3lczC1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.1)
B	RVP	e3lczB1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.1)
A	HGLS	e3lczA1	A: a/b three-layered sandwiches	X: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	F: HGLS	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	6.20.20.10	Special	Other non-globular	Chaperone, DNAj Protein	Chain A	CATH (4.3.0)
C	6.20.20.10	Special	Other non-globular	Chaperone, DNAj Protein	Chain A	CATH (4.3.0)
B	6.20.20.10	Special	Other non-globular	Chaperone, DNAj Protein	Chain A	CATH (4.3.0)
A	6.20.20.10	Special	Other non-globular	Chaperone, DNAj Protein	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF15777	Tryptophan RNA-binding attenuator protein inhibitory protein (Anti-TRAP)	Tryptophan RNA-binding attenuator protein inhibitory protein		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Inhibitor of TRAP, regulated by T-BOX (Trp) sequence RtpA	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR031538	Tryptophan RNA-binding attenuator protein inhibitory protein	Family
A, B, C, D	IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.