3L9F

The Crystal Structure of smu.1604c from Streptococcus mutans UA159

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF03551,PF10400e3l9fA1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03551,PF10400ECOD (1.6)
BPF03551,PF10400e3l9fB1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03551,PF10400ECOD (1.6)
CPF03551,PF10400e3l9fC1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03551,PF10400ECOD (1.6)
DPF03551,PF10400e3l9fD1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03551,PF10400ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)
A6.10.140.1570 Special Helix non-globular Helix Hairpins CATH (4.3.0)
B1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)
B6.10.140.1570 Special Helix non-globular Helix Hairpins CATH (4.3.0)
C1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)
C6.10.140.1570 Special Helix non-globular Helix Hairpins CATH (4.3.0)
D1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)
D6.10.140.1570 Special Helix non-globular Helix Hairpins CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF10400Virulence activator alpha C-term (Vir_act_alpha_C)Virulence activator alpha C-term- Family
A, B, C, D
PF03551Transcriptional regulator PadR-like family (PadR)Transcriptional regulator PadR-like familyMembers of this family are transcriptional regulators that appear to be related to the Pfam:PF01047 family. This family includes PadR Swiss:Q9EXE6 a protein that is involved in negative regulation of phenolic acid metabolism.Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B, C, D
IPR018309Transcription regulator PadR, C-terminalDomain
A, B, C, D
IPR005149Transcription regulator PadR, N-terminalDomain
A, B, C, D
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily