3KML | pdb_00003kml

Circular Permutant of the Tobacco Mosaic Virus


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
QRVPe3kmlQ1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
PRVPe3kmlP1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
ORVPe3kmlO1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
NRVPe3kmlN1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
MRVPe3kmlM1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
LRVPe3kmlL1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
KRVPe3kmlK1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
JRVPe3kmlJ1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
IRVPe3kmlI1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
HRVPe3kmlH1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
GRVPe3kmlG1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
FRVPe3kmlF1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
ERVPe3kmlE1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
DRVPe3kmlD1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
CRVPe3kmlC1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
BRVPe3kmlB1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
Azf-C3HC4e3kmlA1 A: alpha bundlesX: Thioredoxin-likeH: ClpP/crotonaseT: ClpP/crotonaseF: zf-C3HC4ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
Q1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
P1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
O1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
N1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
M1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
L1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
K1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
J1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
I1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
H1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
G1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
F1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
E1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
D1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
C1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
B1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)
A1.20.140.190 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00721Virus coat protein (TMV like) (TMV_coat)Virus coat protein (TMV like)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Coat protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001337Tobacco mosaic virus-like, coat proteinFamily
A, B, C, D, E
IPR036417Tobacco mosaic virus-like, coat protein superfamilyHomologous Superfamily