3KLJ | pdb_00003klj

Crystal structure of NADH:rubredoxin oxidoreductase from Clostridium acetobutylicum


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APyr_redoxe3kljA1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: HTHT: winged helix domainF: Pyr_redoxECOD (v294.1)
APeptidase_C1e3kljA3 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: HTHT: winged helix domainF: Peptidase_C1ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
A3.30.390.30 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07992Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox_2)Pyridine nucleotide-disulphide oxidoreductaseThis family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain. Domain
PF18267Rubredoxin NAD+ reductase C-terminal domain (Rubredoxin_C)Rubredoxin NAD+ reductase C-terminal domainThis is the C-terminal domain of NADH rubredoxin oxidoreductase present in Clostridium acetobutylicum. The majority of obligatory anaerobes detoxify micro-aerobic environments by consuming O2 via H2O-forming NADH oxidase. This enzyme offers an altern ...This is the C-terminal domain of NADH rubredoxin oxidoreductase present in Clostridium acetobutylicum. The majority of obligatory anaerobes detoxify micro-aerobic environments by consuming O2 via H2O-forming NADH oxidase. This enzyme offers an alternate reaction pathway for scavenging of O2 and reactive oxygen species, wherein the reducing equivalent is obtained from NADH [1].
Domain