Crystal structure of Putative S41 protease (YP_211611.1) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | PDZ_6 | e3k50A1 | A: a/b three-layered sandwiches | X: Repetitive alpha hairpins | H: ARM repeat | T: ARM repeat | F: PDZ_6 | ECOD (v294.1) |
| A | Peptidase_S41 | e3k50A2 | A: a/b three-layered sandwiches | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Family A G protein-coupled receptor-like | F: Peptidase_S41 | ECOD (v294.1) |
| A | AglB_core-like | e3k50A3 | A: a/b three-layered sandwiches | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Family A G protein-coupled receptor-like | F: AglB_core-like | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.750.170 | Alpha Beta | 2-Layer Sandwich | Transcription Regulator spoIIAA | CATH (4.3.0) | |
| A | 2.30.42.10 | Mainly Beta | Roll | Pdz3 Domain | PDZ domain | CATH (4.3.0) |
| A | 3.90.226.10 | Alpha Beta | Alpha-Beta Complex | 2-enoyl-CoA Hydratase | Chain A, domain 1 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative S41 protease |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR005151 | Tail specific protease | Domain | |
| IPR029045 | ClpP/crotonase-like domain superfamily | Homologous Superfamily | |
| IPR041489 | PDZ domain 6 | Domain | |
| IPR001478 | PDZ domain | Domain | |
| IPR036034 | PDZ superfamily | Homologous Superfamily | |
| IPR041613 | Peptidase S41, N-terminal | Domain |














