3K1Q | pdb_00003k1q

Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics

External Resource: Annotation

Domain Annotation: ECOD Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X	Toxin_3	e3k1qX1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
W	Toxin_3	e3k1qW1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
V	Toxin_3	e3k1qV1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
U	Toxin_3	e3k1qU1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
Q	Toxin_3	e3k1qQ1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
P	Toxin_3	e3k1qP1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
O	Toxin_3	e3k1qO1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
K	Toxin_3	e3k1qK1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
J	Toxin_3	e3k1qJ1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
I	Toxin_3	e3k1qI1	A: alpha arrays	X: DEATH domain	H: omega toxin-related	T: Scorpion toxin-like	F: Toxin_3	ECOD (v295)
Y	RVP	e3k1qY1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
T	RVP	e3k1qT1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
S	RVP	e3k1qS1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
R	RVP	e3k1qR1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
N	RVP	e3k1qN1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
M	RVP	e3k1qM1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
L	RVP	e3k1qL1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
H	RVP	e3k1qH1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
G	RVP	e3k1qG1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
F	Capsid_VP7	e3k1qF1	A: alpha arrays	X: Outer capsid protein sigma 3-related	H: Outer capsid protein sigma 3-related	T: Outer capsid protein sigma 3-related	F: Capsid_VP7	ECOD (v295)
E	RVP	e3k1qE1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
D	RVP	e3k1qD1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v295)
C	zf-C2H2_6	e3k1qC2	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: zf-C2H2_6	ECOD (v295)
C	Lamba1_VP3	e3k1qC1	A: alpha arrays	X: Scaffolding protein GPB	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Lamba1_VP3	ECOD (v295)
B	Lamba1_VP3	e3k1qB2	A: alpha arrays	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: Lamba1_VP3	ECOD (v295)
A	VEGFR-1-like_Ig-like	e3k1qA9	A: alpha arrays	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: VEGFR-1-like_Ig-like	ECOD (v295)

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.