3JX7 | pdb_00003jx7

Bacillus cereus alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-METHYLADENINE analog

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3jx7a1 All alpha proteins alpha-alpha superhelix ARM repeat automated matches automated matches (Bacillus cereus ATCC 10987 ) [TaxId: 222523 ], SCOPe (2.08)
Ad3jx7a2 Artifacts Tags Tags Tags N-terminal Tags (Bacillus cereus ATCC 10987 ) [TaxId: 222523 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyARM repeat-like 8086910 3000116 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADNA_alkylatione3jx7A1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Hairpin loop containing domain-likeT: ACT-likeF: DNA_alkylationECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.25.10.90 Mainly Alpha Alpha Horseshoe Leucine-rich Repeat Variant CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08713DNA alkylation repair enzyme (DNA_alkylation)DNA alkylation repair enzyme- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*CP*CP*CP*GP*TP*TP*AP*GP*TP*CP*CP*G)-3')---
DNA (5'-D(*CP*GP*GP*AP*CP*TP*(DZM)P*AP*CP*GP*GP*G)-3')---
alkylpurine DNA glycosylase AlkD - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR014825DNA alkylation repair enzymeFamily
IPR016024Armadillo-type foldHomologous Superfamily