3JCS

2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth C]SCOP2 Family60S ribosomal protein L4 C-terminal domain-like8049945 4006700 SCOP2 (2022-06-29)
K [auth C]SCOP2 FamilyRibosomal protein L48052824 4003628 SCOP2 (2022-06-29)
K [auth C]SCOP2 Superfamily60S ribosomal protein L4 C-terminal domain-like8052825 3002143 SCOP2 (2022-06-29)
K [auth C]SCOP2 SuperfamilyRibosomal protein L48052826 3001146 SCOP2 (2022-06-29)
L [auth D]SCOP2B SuperfamilyRL5-like8077509 3001709 SCOP2B (2022-06-29)
R [auth J]SCOP2 FamilyRibosomal protein L148072045 4001826 SCOP2 (2022-06-29)
R [auth J]SCOP2 Superfamily50S Ribosomal protein L14-like8072046 3000433 SCOP2 (2022-06-29)
R [auth J]SCOP2B Superfamily50S Ribosomal protein L14-like8107090 3000433 SCOP2B (2022-06-29)
T [auth L]SCOP2 FamilyRibosomal proteins L15p and L18e8077128 4003555 SCOP2 (2022-06-29)
T [auth L]SCOP2 SuperfamilyRibosomal proteins L15p and L18e8077129 3001045 SCOP2 (2022-06-29)
T [auth L]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8107086 3001045 SCOP2B (2022-06-29)
U [auth M]SCOP2 FamilyL15e8082482 4000945 SCOP2 (2022-06-29)
U [auth M]SCOP2 SuperfamilyRibosomal proteins S24e L23 and L15e8082483 3000210 SCOP2 (2022-06-29)
V [auth N]SCOP2B SuperfamilyRibosomal protein L16p/L10e8107098 3000884 SCOP2B (2022-06-29)
W [auth O]SCOP2 FamilyRibosomal protein L5e and archael L18-like8049691 4006591 SCOP2 (2022-06-29)
W [auth O]SCOP2 SuperfamilyTranslational machinery components8052892 3000571 SCOP2 (2022-06-29)
W [auth O]SCOP2B SuperfamilyTranslational machinery components8107094 3000571 SCOP2B (2022-06-29)
X [auth P]SCOP2 FamilyRibosomal proteins L15p and L18e8046516 4003555 SCOP2 (2022-06-29)
X [auth P]SCOP2 SuperfamilyRibosomal proteins L15p and L18e8095981 3001045 SCOP2 (2022-06-29)
Y [auth Q]SCOP2 FamilyRibosomal protein L19 (L19e)8077478 4001138 SCOP2 (2022-06-29)
Y [auth Q]SCOP2 SuperfamilyRibosomal protein L19 (L19e)8077479 3000890 SCOP2 (2022-06-29)
BA [auth T]SCOP2B SuperfamilyRibosomal protein L228107100 3001078 SCOP2B (2022-06-29)
CA [auth U]SCOP2 Family60S Ribosomal protein L22e8049499 4006528 SCOP2 (2022-06-29)
CA [auth U]SCOP2 Superfamily60S Ribosomal protein L22e8053066 3002158 SCOP2 (2022-06-29)
DA [auth V]SCOP2 FamilyL23p8061167 4000943 SCOP2 (2022-06-29)
DA [auth V]SCOP2 SuperfamilyRibosomal proteins S24e L23 and L15e8077083 3000210 SCOP2 (2022-06-29)
GA [auth Y]SCOP2 FamilyRibosomal protein L27e8049510 4006529 SCOP2 (2022-06-29)
GA [auth Y]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053056 3000334 SCOP2 (2022-06-29)
JA [auth b]SCOP2 FamilyRibosomal protein L29e8049525 4006531 SCOP2 (2022-06-29)
JA [auth b]SCOP2 SuperfamilyRibosomal protein L29e8053039 3002157 SCOP2 (2022-06-29)
KA [auth c]SCOP2 FamilyRibosomal protein L30p/L7e8052942 4001360 SCOP2 (2022-06-29)
KA [auth c]SCOP2 FamilyRibosomal L30p/L7e protein N-terminal domain-lke8050360 4006854 SCOP2 (2022-06-29)
KA [auth c]SCOP2 SuperfamilyRibosomal protein L30p/L7e8052944 3001378 SCOP2 (2022-06-29)
KA [auth c]SCOP2 SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052943 3002152 SCOP2 (2022-06-29)
LA [auth d]SCOP2B SuperfamilyL30e-like8107084 3001739 SCOP2B (2022-06-29)
NA [auth f]SCOP2 FamilyRibosomal protein L32e8107243 4003517 SCOP2 (2022-06-29)
NA [auth f]SCOP2 SuperfamilyRibosomal protein L32e8107244 3000982 SCOP2 (2022-06-29)
OA [auth g]SCOP2B SuperfamilyTranslational proteins8107088 3000811 SCOP2B (2022-06-29)
PA [auth h]SCOP2 FamilyRibosomal protein L34e-like8048733 4006193 SCOP2 (2022-06-29)
PA [auth h]SCOP2 SuperfamilyRibosomal protein L34e-like8053539 3002203 SCOP2 (2022-06-29)
QA [auth i]SCOP2 FamilyRibosomal protein L36e8048626 4006168 SCOP2 (2022-06-29)
QA [auth i]SCOP2 SuperfamilyRibosomal protein L36e8053118 3002161 SCOP2 (2022-06-29)
SA [auth k]SCOP2 FamilyRibosomal L38e protein-like8049537 4006532 SCOP2 (2022-06-29)
SA [auth k]SCOP2 SuperfamilyRibosomal L38e protein-like8053568 3002206 SCOP2 (2022-06-29)
TA [auth l]SCOP2 Familyribosomal protein l39e8097699 4001518 SCOP2 (2022-06-29)
TA [auth l]SCOP2 SuperfamilyRibosomal protein L39e8097700 3001756 SCOP2 (2022-06-29)
UA [auth m]SCOP2B SuperfamilyZn-binding ribosomal proteins8101419 3001320 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth B]PF00297e3jcsB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
K [auth C]PF00573,PF14374e3jcsC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573,PF14374ECOD (1.6)
L [auth D]PF00281,PF00673e3jcsD1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
M [auth E]PF00347e3jcsE2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
N [auth F]PF01159e3jcsF1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
O [auth G]PF01248e3jcsG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
P [auth H]PF00572e3jcsH1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
R [auth J]PF00238e3jcsJ1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
S [auth K]PF00467,PF01929e3jcsK1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
T [auth L]PF00828e3jcsL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
U [auth M]PF00827e3jcsM1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
V [auth N]PF00252e3jcsN1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
W [auth O]PF14204,PF17144e3jcsO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
X [auth P]PF17135e3jcsP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
Y [auth Q]PF01280e3jcsQ2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
Y [auth Q]PF01280e3jcsQ1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
Z [auth R]F_UNCLASSIFIEDe3jcsR2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
Z [auth R]PF01775e3jcsR1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
AA [auth S]PF01157e3jcsS1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
BA [auth T]PF00237e3jcsT1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
CA [auth U]PF01776e3jcsU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
DA [auth V]PF00276e3jcsV1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
EA [auth W]PF16906e3jcsW1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
FA [auth X]PF01246e3jcsX1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
GA [auth Y]PF00467,PF01777e3jcsY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
HA [auth Z]PF01778e3jcsZ1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
IA [auth a]PF00831e3jcsa1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
JA [auth b]PF01779e3jcsb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
KA [auth c]PF00327,PF08079e3jcsc1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
LA [auth d]PF01248e3jcsd1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
MA [auth e]PF01198e3jcse1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
NA [auth f]PF01655e3jcsf1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
OA [auth g]PF01247e3jcsg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
PA [auth h]PF01199e3jcsh1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
QA [auth i]PF01158e3jcsi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
RA [auth j]PF01907e3jcsj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
SA [auth k]PF01781e3jcsk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
TA [auth l]PF00832e3jcsl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
UA [auth m]PF01780e3jcsm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
VA [auth n]PF00935e3jcsn1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
I [auth A]PF00181e3jcsA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
I [auth A]PF03947e3jcsA2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
K [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
K [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
L [auth D]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
L [auth D]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
M [auth E]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
O [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
R [auth J]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
S [auth K]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
S [auth K]PF00467KOW motif (KOW)KOW motif- Family
T [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
U [auth M]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
V [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
W [auth O]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
W [auth O]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
X [auth P]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
Y [auth Q]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
Z [auth R]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
AA [auth S]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
BA [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CA [auth U]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
DA [auth V]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
GA [auth Y]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
GA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
HA [auth Z]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
IA [auth a]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
JA [auth b]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
KA [auth c]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
KA [auth c]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
LA [auth d]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
MA [auth e]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
NA [auth f]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
OA [auth g]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
PA [auth h]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
QA [auth i]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
RA [auth j]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
SA [auth k]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
TA [auth l]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
UA [auth m]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]26S alpha ribosomal RNA---
J [auth B]ribosomal protein L3---
K [auth C]ribosomal protein L4
L [auth D]ribosomal protein L5
M [auth E]ribosomal protein L6
N [auth F]ribosomal protein L6e---
O [auth G]ribosomal protein L8e -
P [auth H]ribosomal protein L13---
Q [auth I]ribosomal protein L13e---
R [auth J]ribosomal protein L14
S [auth K]ribosomal protein L14e
B [auth 2]26S delta ribosomal RNA---
T [auth L]ribosomal protein L15
U [auth M]ribosomal protein L15e
V [auth N]ribosomal protein L16
W [auth O]ribosomal protein L18
X [auth P]ribosomal protein L18e
Y [auth Q]ribosomal protein L19e
Z [auth R]ribosomal protein L20e
AA [auth S]ribosomal protein L21e
BA [auth T]ribosomal protein L22
CA [auth U]ribosomal protein L22e
C [auth 3]26S gamma ribosomal RNA---
DA [auth V]ribosomal protein L23
EA [auth W]ribosomal protein L24---
FA [auth X]ribosomal protein L24e---
GA [auth Y]ribosomal protein L27e
HA [auth Z]ribosomal protein L28e
IA [auth a]ribosomal protein L29
JA [auth b]ribosomal protein L29e
KA [auth c]ribosomal protein L30
LA [auth d]ribosomal protein L30e -
MA [auth e]ribosomal protein L31e
D [auth 4]26S delta ribosomal RNA---
NA [auth f]ribosomal protein L32e
OA [auth g]ribosomal protein L33e
PA [auth h]ribosomal protein L34e
QA [auth i]ribosomal protein L36e
RA [auth j]ribosomal protein L37e
SA [auth k]ribosomal protein L38e
TA [auth l]ribosomal protein L39e
UA [auth m]ribosomal protein L43e
VA [auth n]ribosomal protein L44e
E [auth 5]26S epsilon ribosomal RNA---
F [auth 6]26S zeta ribosomal RNA---
G [auth 7]5.8S ribosomal RNA---
H [auth 8]5S ribosomal RNA---
I [auth A]ribosomal protein L2---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
K [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
K [auth C]IPR002136Large ribosomal subunit protein uL4Family
K [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
K [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
K [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
L [auth D]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
L [auth D]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
L [auth D]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
L [auth D]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
L [auth D]IPR002132Large ribosomal subunit protein uL5Family
M [auth E]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
M [auth E]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
M [auth E]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
M [auth E]IPR000702Large ribosomal subunit protein uL6-likeFamily
O [auth G]IPR001921Large ribosomal subunit protein eL8Family
O [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
O [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
O [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
R [auth J]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
R [auth J]IPR000218Large ribosomal subunit protein uL14Family
R [auth J]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
S [auth K]IPR039660Large ribosomal subunit protein eL14Family
S [auth K]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
S [auth K]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
S [auth K]IPR002784Large ribosomal subunit protein eL14 domainDomain
S [auth K]IPR005824KOWDomain
S [auth K]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
T [auth L]IPR030878Large ribosomal subunit protein uL15Family
T [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
U [auth M]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
U [auth M]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
U [auth M]IPR000439Large ribosomal subunit protein eL15Family
V [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
V [auth N]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
V [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
V [auth N]IPR047873Large ribosomal subunit protein uL16Family
V [auth N]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
W [auth O]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
W [auth O]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
X [auth P]IPR021131Large ribosomal subunit protein uL15/eL18Domain
X [auth P]IPR000039Large ribosomal subunit protein eL18Family
X [auth P]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Y [auth Q]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Y [auth Q]IPR039547Large ribosomal subunit protein eL19Family
Y [auth Q]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Y [auth Q]IPR000196Large ribosomal subunit protein eL19 domainDomain
Y [auth Q]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
Z [auth R]IPR028877Large ribosomal subunit protein eL20Family
Z [auth R]IPR023573Large ribosomal subunit protein eL20 domainDomain
Z [auth R]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
AA [auth S]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
AA [auth S]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
AA [auth S]IPR001147Large ribosomal subunit protein eL21Family
AA [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth T]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
BA [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
BA [auth T]IPR001063Large ribosomal subunit protein uL22Family
BA [auth T]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
CA [auth U]IPR002671Large ribosomal subunit protein eL22Family
CA [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
DA [auth V]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
DA [auth V]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
DA [auth V]IPR019985Large ribosomal subunit protein uL23Family
DA [auth V]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
DA [auth V]IPR013025Large ribosomal subunit protein uL23-likeFamily
GA [auth Y]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
GA [auth Y]IPR005824KOWDomain
GA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
GA [auth Y]IPR001141Large ribosomal subunit protein eL27Family
GA [auth Y]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
HA [auth Z]IPR029004Ribosomal eL28/Mak16Domain
HA [auth Z]IPR002672Large ribosomal subunit protein eL28Family
IA [auth a]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
IA [auth a]IPR001854Large ribosomal subunit protein uL29Family
IA [auth a]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
JA [auth b]IPR002673Large ribosomal subunit protein eL29Family
KA [auth c]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
KA [auth c]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
KA [auth c]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
KA [auth c]IPR039699Large ribosomal subunit protein uL30Family
KA [auth c]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
KA [auth c]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
KA [auth c]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
LA [auth d]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
LA [auth d]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
LA [auth d]IPR039109Large ribosomal subunit protein eL30-likeFamily
LA [auth d]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
MA [auth e]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
MA [auth e]IPR000054Large ribosomal subunit protein eL31Family
NA [auth f]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
NA [auth f]IPR001515Large ribosomal subunit protein eL32Family
OA [auth g]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
OA [auth g]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
OA [auth g]IPR001780Large ribosomal subunit protein eL33Family
PA [auth h]IPR008195Large ribosomal subunit protein eL34Family
QA [auth i]IPR000509Large ribosomal subunit protein eL36Family
QA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
RA [auth j]IPR001569Large ribosomal subunit protein eL37Family
RA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
RA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SA [auth k]IPR002675Large ribosomal subunit protein eL38Family
SA [auth k]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
TA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
TA [auth l]IPR000077Large ribosomal subunit protein eL39Family
TA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
UA [auth m]IPR002674Large ribosomal subunit protein eL43Family
UA [auth m]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UA [auth m]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
VA [auth n]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VA [auth n]IPR000552Large ribosomal subunit protein eL42Family