3J8C | pdb_00003j8c

Model of the human eIF3 PCI-MPN octamer docked into the 43S EM map


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth K]SCOP2B SuperfamilyWinged helix DNA-binding domain 8002864 3000034 SCOP2B (2022-06-29)
F [auth K]SCOP2B SuperfamilyARM repeat-like 8002866 3000116 SCOP2B (2022-06-29)
E [auth H]SCOP2 FamilyJAB1/Mov34/MPN/PAD-1/JAMM domain-like 8048975 4006292 SCOP2 (2022-06-29)
E [auth H]SCOP2 SuperfamilyJAB1/MPN domain-like 8053284 3001105 SCOP2 (2022-06-29)
D [auth F]SCOP2 FamilyEIF3 subunit F C-terminal domain-like 8048104 4005957 SCOP2 (2022-06-29)
D [auth F]SCOP2 FamilyJAB1/Mov34/MPN/PAD-1/JAMM domain-like 8048970 4006292 SCOP2 (2022-06-29)
D [auth F]SCOP2 SuperfamilyEIF3 subunit F C-terminal domain-like 8053241 3002167 SCOP2 (2022-06-29)
D [auth F]SCOP2 SuperfamilyJAB1/MPN domain-like 8053242 3001105 SCOP2 (2022-06-29)
C [auth E]SCOP2 FamilyEIF3E-like 8044846 4004173 SCOP2 (2022-06-29)
C [auth E]SCOP2 FamilyPCI domain (PINT motif) 8091485 4000147 SCOP2 (2022-06-29)
C [auth E]SCOP2 SuperfamilyTPR-like 8091483 3001345 SCOP2 (2022-06-29)
C [auth E]SCOP2 SuperfamilyWinged helix DNA-binding domain 8091486 3000034 SCOP2 (2022-06-29)
B [auth C]SCOP2 FamilyEukaryotic translation initiation factor 3 subunit C (EIF3C), N-terminal domain-like 8047254 4005530 SCOP2 (2022-06-29)
B [auth C]SCOP2 FamilyPCI domain (PINT motif) 8093054 4000147 SCOP2 (2022-06-29)
B [auth C]SCOP2 SuperfamilyTPR-like 8093044 3001345 SCOP2 (2022-06-29)
B [auth C]SCOP2 SuperfamilyWinged helix DNA-binding domain 8093051 3000034 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth M]e3j8cM1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: RhaAF:ECOD (20:10:01)
G [auth L]e3j8cL1 A: Insertion subdomain in DsbA-likeX: Insertion subdomain in DsbA-likeH: Insertion subdomain in DsbA-likeT: C1-setF:ECOD (20:10:01)
F [auth K]e3j8cK1 A: Insertion subdomain in DsbA-likeX: Insertion subdomain in DsbA-likeH: Insertion subdomain in DsbA-likeT: C1-setF:ECOD (20:10:01)
E [auth H]e3j8cH1 A: Lipocalins/StreptavidinX: Enterocin 7A and 7BH: Enterocin 7A and 7BT: SHQ1-like_CSF:ECOD (20:10:01)
D [auth F]e3j8cF1 A: Lipocalins/StreptavidinX: Enterocin 7A and 7BH: Enterocin 7A and 7BT: SHQ1-like_CSF:ECOD (20:10:01)
C [auth E]e3j8cE1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: RhaAF:ECOD (20:10:01)
B [auth C]e3j8cC1 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: RhaAF:ECOD (20:10:01)
B [auth C]e3j8cC2 A: jelly-rollX: Double-stranded beta-helixH: Double-stranded beta-helixT: Ribosomal_L24eF:ECOD (20:10:01)
Ae3j8cA1 A: Lipocalins/StreptavidinX: Enterocin 7A and 7BH: Enterocin 7A and 7BT: SHQ1-like_CSF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth M]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
F [auth K]PF10075CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K)CSN8/PSMD8/EIF3K family- Family
E [auth H]PF19445C-terminal region of eIF3h (eIF3h_C)C-terminal region of eIF3h- Family
C [auth E]PF09440eIF3 subunit 6 N terminal domain (eIF3_N)eIF3 subunit 6 N terminal domainThis is the N terminal domain of subunit 6 translation initiation factor eIF3. Domain
C [auth E]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
B [auth C]PF05470Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF-3c_N)Eukaryotic translation initiation factor 3 subunit 8 N-terminus- Repeat
B [auth C]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
PF22591eIF3a, PCI domain, TPR-like region (eIF3a_PCI_TPR-like)eIF3a, PCI domain, TPR-like region- Repeat
PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
H [auth M]Eukaryotic translation initiation factor 3 subunit M
G [auth L]Eukaryotic translation initiation factor 3 subunit L
F [auth K]Eukaryotic translation initiation factor 3 subunit K
E [auth H]Eukaryotic translation initiation factor 3 subunit H
D [auth F]Eukaryotic translation initiation factor 3 subunit F
C [auth E]Eukaryotic translation initiation factor 3 subunit E
B [auth C]Eukaryotic translation initiation factor 3 subunit C
Eukaryotic translation initiation factor 3 subunit A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
H [auth M]IPR016024Armadillo-type foldHomologous Superfamily
H [auth M]IPR040750eIF3 subunit M, C-terminal helix domainDomain
H [auth M]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
H [auth M]IPR027528Eukaryotic translation initiation factor 3 subunit MFamily
H [auth M]IPR045237Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7Family
H [auth M]IPR000717Proteasome component (PCI) domainDomain
G [auth L]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
G [auth L]IPR000717Proteasome component (PCI) domainDomain
G [auth L]IPR019382Translation initiation factor 3 complex subunit LFamily
F [auth K]IPR016024Armadillo-type foldHomologous Superfamily
F [auth K]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
F [auth K]IPR033464CSN8/PSMD8/EIF3KDomain
F [auth K]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
F [auth K]IPR016020Translation initiation factor 3, subunit 12, N-terminal, eukaryoticHomologous Superfamily
F [auth K]IPR000717Proteasome component (PCI) domainDomain
F [auth K]IPR009374Eukaryotic translation initiation factor 3 subunit KFamily
E [auth H]IPR027524Eukaryotic translation initiation factor 3 subunit HFamily
E [auth H]IPR045810eIF3h, C-terminalDomain
E [auth H]IPR050242JAMM/MPN+ metalloenzymes, peptidase M67AFamily
E [auth H]IPR037518MPN domainDomain
E [auth H]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
D [auth F]IPR027531Eukaryotic translation initiation factor 3 subunit FFamily
D [auth F]IPR024969EIF3F/CSN6-like, C-terminalDomain
D [auth F]IPR037518MPN domainDomain
D [auth F]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
C [auth E]IPR016650Eukaryotic translation initiation factor 3 subunit EFamily
C [auth E]IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalDomain
C [auth E]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
C [auth E]IPR000717Proteasome component (PCI) domainDomain
B [auth C]IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainDomain
B [auth C]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
B [auth C]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
B [auth C]IPR027516Eukaryotic translation initiation factor 3 subunit CFamily
B [auth C]IPR000717Proteasome component (PCI) domainDomain
B [auth C]IPR058999EIF3CL-like, C-terminal domainDomain
IPR027512Eukaryotic translation initiation factor 3 subunit AFamily
IPR054711eIF3a, PCI domain, TPR-like regionDomain
IPR000717Proteasome component (PCI) domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
H [auth M]PharosQ7L2H7
F [auth K]PharosQ9UBQ5
E [auth H]PharosO15372
D [auth F]PharosO00303
C [auth E]PharosP60228
B [auth C]PharosQ99613
PharosQ14152