Electron cryo-microscopy of Human Papillomavirus Type 16 capsid
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A [auth B] | SCOP2B Superfamily | Group I dsDNA viruses | 8041026 | 3000939 | SCOP2B (2022-06-29) |
| B [auth A] | SCOP2B Superfamily | Group I dsDNA viruses | 8041026 | 3000939 | SCOP2B (2022-06-29) |
| C [auth E] | SCOP2B Superfamily | Group I dsDNA viruses | 8041026 | 3000939 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Group I dsDNA viruses | 8041026 | 3000939 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | Group I dsDNA viruses | 8041026 | 3000939 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Group I dsDNA viruses | 8041026 | 3000939 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth B] | Abhydrolase_3 | e3j6rB1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Ribosomal protein L14-related | T: Ribosomal protein L14-related | F: Abhydrolase_3 | ECOD (develop294) |
| B [auth A] | RNase_T | e3j6rA1 | A: alpha bundles | X: alpha/beta-Hydrolases | H: alpha/beta-Hydrolases | T: alpha/beta-Hydrolases | F: RNase_T | ECOD (develop294) |
| C [auth E] | RNase_T | e3j6rE1 | A: alpha bundles | X: alpha/beta-Hydrolases | H: alpha/beta-Hydrolases | T: alpha/beta-Hydrolases | F: RNase_T | ECOD (develop294) |
| D | RNase_T | e3j6rD1 | A: alpha bundles | X: alpha/beta-Hydrolases | H: alpha/beta-Hydrolases | T: alpha/beta-Hydrolases | F: RNase_T | ECOD (develop294) |
| E [auth C] | RNase_T | e3j6rC1 | A: alpha bundles | X: alpha/beta-Hydrolases | H: alpha/beta-Hydrolases | T: alpha/beta-Hydrolases | F: RNase_T | ECOD (develop294) |
| F | RNase_T | e3j6rF1 | A: alpha bundles | X: alpha/beta-Hydrolases | H: alpha/beta-Hydrolases | T: alpha/beta-Hydrolases | F: RNase_T | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00500 | L1 (late) protein (Late_protein_L1) | L1 (late) protein | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036973 | Major capsid L1 (late) superfamily, Papillomavirus | Homologous Superfamily | |
| IPR011222 | Double-stranded DNA virus, group I, capsid | Homologous Superfamily | |
| IPR002210 | Major capsid L1 (late) protein, Papillomavirus | Family |














