3IMP | pdb_00003imp

New crystal form of the C-terminal domain of Helicobacter pylori MotB (residues 125-256)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
E [auth A]	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)
A [auth B]	SCOP2B Superfamily	OmpA-like	8092164	3001650	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	OmpA	e3impL1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
K	OmpA	e3impK1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
J	OmpA	e3impJ1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
I	OmpA	e3impI1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
H	OmpA	e3impH1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
G	OmpA	e3impG1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
F	OmpA	e3impF1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
E [auth A]	OmpA	e3impA1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
D [auth E]	OmpA	e3impE1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
C [auth D]	OmpA	e3impD1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
B [auth C]	OmpA	e3impC1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)
A [auth B]	OmpA	e3impB1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: OmpA-like (From Topology)	T: OmpA-like	F: OmpA	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
L	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
K	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
J	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
I	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
H	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
G	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
F	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
E [auth A]	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
D [auth E]	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
C [auth D]	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
B [auth C]	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)
A [auth B]	3.30.1330.60	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	PF00691	OmpA family (OmpA)	OmpA family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	Chemotaxis protein motB	identical protein binding protein binding binding	chemotaxis response to stimulus taxis response to chemical response to external stimulus locomotion bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum stator complex bacterial-type flagellum basal body protein-containing complex bacterial-type flagellum motor plasma membrane protein complex membrane plasma membrane membrane protein complex cell periphery cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR006665	OmpA-like domain	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR025713	Motility protein B-like, N-terminal domain	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR050330	Bacterial Outer Membrane Structural/Functional	Family
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR036737	OmpA-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.