Small outer capsid protein (Soc) from bacteriophage RB69
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | adh_short | e3igeA1 | A: a/b three-layered sandwiches | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: adh_short | ECOD (v294.1) |
| B | adh_short | e3igeB1 | A: a/b three-layered sandwiches | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: adh_short | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.90.930.20 | Alpha Beta | Alpha-Beta Complex | Outer Surface Protein A | domain 3 | CATH (4.3.0) |
| B | 3.90.930.20 | Alpha Beta | Alpha-Beta Complex | Outer Surface Protein A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF16855 | Small outer capsid protein (Soc) | Small outer capsid protein | This protein attaches to and stabilises the bacteriophage capsid [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Soc small outer capsid protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038151 | Small outer capsid protein superfamily | Homologous Superfamily | |
| IPR031743 | Small outer capsid protein | Family |














