3IG9 | pdb_00003ig9

Small outer capsid protein (SOC) of bacteriophage RB69

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilySoc/TGAM_1934-like 8093183 3002690 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySoc/TGAM_1934-like 8093183 3002690 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySoc/TGAM_1934-like 8093183 3002690 SCOP2B (2022-06-29)
DSCOP2 FamilySoc-like 8046253 4004986 SCOP2 (2022-06-29)
DSCOP2 SuperfamilySoc/TGAM_1934-like 8093183 3002690 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAP2e3ig9A1 A: a/b three-layered sandwichesX: DNA-binding domainH: GCC-box binding domain-likeT: GCC-box binding domain-likeF: AP2ECOD (v294.1)
Badh_shorte3ig9B1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: adh_shortECOD (v294.1)
Cadh_shorte3ig9C1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: adh_shortECOD (v294.1)
Dadh_shorte3ig9D1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: adh_shortECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.90.930.20 Alpha Beta Alpha-Beta Complex Outer Surface Protein A domain 3CATH (4.3.0)
B3.90.930.20 Alpha Beta Alpha-Beta Complex Outer Surface Protein A domain 3CATH (4.3.0)
C3.90.930.20 Alpha Beta Alpha-Beta Complex Outer Surface Protein A domain 3CATH (4.3.0)
D3.90.930.20 Alpha Beta Alpha-Beta Complex Outer Surface Protein A domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF16855Small outer capsid protein (Soc)Small outer capsid proteinThis protein attaches to and stabilises the bacteriophage capsid [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Soc small outer capsid protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR038151Small outer capsid protein superfamilyHomologous Superfamily
A, B, C, D
IPR031743Small outer capsid proteinFamily