3HS0 | pdb_00003hs0

Cobra Venom Factor (CVF) in complex with human factor B

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth I]SCOP2B SuperfamilySushi/CCP/SCR domain 8043500 3000902 SCOP2B (2022-06-29)
H [auth I]SCOP2B SuperfamilyTrypsin-like serine proteases 8042311 3000114 SCOP2B (2022-06-29)
H [auth I]SCOP2B SuperfamilyvWA-like 8042312 3000832 SCOP2B (2022-06-29)
H [auth I]SCOP2B SuperfamilySushi/CCP/SCR domain 8043505 3000902 SCOP2B (2022-06-29)
H [auth I]SCOP2B SuperfamilySushi/CCP/SCR domain 8043502 3000902 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySushi/CCP/SCR domain 8043500 3000902 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTrypsin-like serine proteases 8042311 3000114 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyvWA-like 8042312 3000832 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySushi/CCP/SCR domain 8043502 3000902 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySushi/CCP/SCR domain 8043505 3000902 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth I]Ribosomal_L36e3hs0I3 A: alpha bundlesX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: Ribosomal_L36ECOD (develop294)
H [auth I]V-sete3hs0I8 A: alpha bundlesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: V-setECOD (develop294)
DYonKe3hs0D4 A: alpha bundlesX: DP domainH: DP domainT: DP domainF: YonKECOD (develop294)
DHisKAe3hs0D3 A: alpha bundlesX: Thioredoxin-likeH: ClpP/crotonaseT: ClpP/crotonaseF: HisKAECOD (develop294)
G [auth H]RAe3hs0H1 A: alpha bundlesX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: RAECOD (develop294)
G [auth H]N6_Mtasee3hs0H3 A: alpha bundlesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: N6_MtaseECOD (develop294)
CN6_Mtasee3hs0C1 A: alpha bundlesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: N6_MtaseECOD (develop294)
F [auth G]YonKe3hs0G1 A: alpha bundlesX: DP domainH: DP domainT: DP domainF: YonKECOD (develop294)
F [auth G]HisKAe3hs0G3 A: alpha bundlesX: Thioredoxin-likeH: ClpP/crotonaseT: ClpP/crotonaseF: HisKAECOD (develop294)
BGlyco_hydro_2e3hs0B2 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Glyco_hydro_2ECOD (develop294)
BLAP1_Ce3hs0B4 A: alpha bundlesX: DP domainH: DP domainT: DP domainF: LAP1_CECOD (develop294)
E [auth F]MG1e3hs0F1 A: alpha bundlesX: Alpha-beta plaitsH: Notch heterodimerization domainT: Notch heterodimerization domainF: MG1ECOD (develop294)
E [auth F]LAP1_Ce3hs0F6 A: alpha bundlesX: DP domainH: DP domainT: DP domainF: LAP1_CECOD (develop294)
AMG1e3hs0A1 A: alpha bundlesX: Alpha-beta plaitsH: Notch heterodimerization domainT: Notch heterodimerization domainF: MG1ECOD (develop294)
ALAP1_Ce3hs0A6 A: alpha bundlesX: DP domainH: DP domainT: DP domainF: LAP1_CECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G [auth H]2.20.210.20 Mainly Beta Single Sheet ubp-family deubiquitinating enzyme fold CATH (4.3.0)
G [auth H]2.60.40.690 Mainly Beta Sandwich Immunoglobulin-like Alpha-macroglobulin, receptor-binding domainCATH (4.3.0)
G [auth H]2.40.50.120 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) CATH (4.3.0)
C2.20.210.20 Mainly Beta Single Sheet ubp-family deubiquitinating enzyme fold CATH (4.3.0)
C2.60.40.690 Mainly Beta Sandwich Immunoglobulin-like Alpha-macroglobulin, receptor-binding domainCATH (4.3.0)
C2.40.50.120 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) CATH (4.3.0)
F [auth G]2.20.130.20 Mainly Beta Single Sheet S-adenosyl-L-methionine-dependent methyltransferases CATH (4.3.0)
F [auth G]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.20.130.20 Mainly Beta Single Sheet S-adenosyl-L-methionine-dependent methyltransferases CATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E [auth F]2.60.40.1930 Mainly Beta Sandwich Immunoglobulin-like Macroglobulin (MG2) domainCATH (4.3.0)
E [auth F]2.60.40.1940 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
E [auth F]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E [auth F]6.20.50.160 Special Other non-globular N-terminal domain of TfIIb CATH (4.3.0)
A2.60.40.1930 Mainly Beta Sandwich Immunoglobulin-like Macroglobulin (MG2) domainCATH (4.3.0)
A2.60.40.1940 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A6.20.50.160 Special Other non-globular N-terminal domain of TfIIb CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D,
H [auth I]		PF00092von Willebrand factor type A domain (VWA)von Willebrand factor type A domainDomain
D,
H [auth I]		PF00084Sushi repeat (SCR repeat) (Sushi)Sushi repeat (SCR repeat)Domain
D,
H [auth I]		PF00089Trypsin (Trypsin)TrypsinDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D,
H [auth I]		Complement factor B
C,
G [auth H]		Cobra venom factor
B,
F [auth G]		Cobra venom factor
A,
E [auth F]		Cobra venom factor

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D,
H [auth I]		IPR011360Complement B/C2Family
D,
H [auth I]		IPR028341Complement factor BFamily
D,
H [auth I]		IPR009003Peptidase S1, PA clanHomologous Superfamily
D,
H [auth I]		IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
D,
H [auth I]		IPR001314Peptidase S1A, chymotrypsin familyFamily
D,
H [auth I]		IPR033116Serine proteases, trypsin family, serine active siteActive Site
D,
H [auth I]		IPR001254Serine proteases, trypsin domainDomain
D,
H [auth I]		IPR002035von Willebrand factor, type ADomain
D,
H [auth I]		IPR000436Sushi/SCR/CCP domainDomain
D,
H [auth I]		IPR018114Serine proteases, trypsin family, histidine active siteActive Site
D,
H [auth I]		IPR035976Sushi/SCR/CCP superfamilyHomologous Superfamily
C,
G [auth H]		IPR019742Alpha-2-macroglobulin, conserved siteConserved Site
C,
G [auth H]		IPR009048Alpha-macroglobulin, receptor-bindingDomain
C,
G [auth H]		IPR041555Macroglobulin domain MG3Domain
C,
G [auth H]		IPR049466Complement component 3, CUB domain, first segmentDomain
C,
G [auth H]		IPR001599Alpha-2-macroglobulinDomain
C,
G [auth H]		IPR047565Alpha-macroglobulin-like, thiol-ester bond-forming regionConserved Site
C,
G [auth H]		IPR048848Complement component 3, CUB domain, second segmentDomain
C,
G [auth H]		IPR018081Anaphylatoxin, complement systemHomologous Superfamily
C,
G [auth H]		IPR035815Complement C3-like, NTR domainDomain
C,
G [auth H]		IPR018933Netrin module, non-TIMP typeDomain
C,
G [auth H]		IPR001840Anaphylatoxin, complement system domainDomain
C,
G [auth H]		IPR041425Complement C3/4/5, macroglobulin domain MG1Domain
C,
G [auth H]		IPR011625Alpha-2-macroglobulin, bait region domainDomain
C,
G [auth H]		IPR001134Netrin domainDomain
C,
G [auth H]		IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldHomologous Superfamily
C,
G [auth H]		IPR011626Alpha-macroglobulin-like, TED domainDomain
C,
G [auth H]		IPR000020Anaphylatoxin/fibulinDomain
C,
G [auth H]		IPR036595Alpha-macroglobulin, receptor-binding domain superfamilyHomologous Superfamily
C,
G [auth H]		IPR002890Macroglobulin domainDomain
C,
G [auth H]		IPR013783Immunoglobulin-like foldHomologous Superfamily
C,
G [auth H]		IPR050473Alpha-2-macroglobulin/Complement systemFamily
C,
G [auth H]		IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidHomologous Superfamily
C,
G [auth H]		IPR040839Macroglobulin domain MG4Domain
B,
F [auth G]		IPR019742Alpha-2-macroglobulin, conserved siteConserved Site
B,
F [auth G]		IPR009048Alpha-macroglobulin, receptor-bindingDomain
B,
F [auth G]		IPR041555Macroglobulin domain MG3Domain
B,
F [auth G]		IPR049466Complement component 3, CUB domain, first segmentDomain
B,
F [auth G]		IPR001599Alpha-2-macroglobulinDomain
B,
F [auth G]		IPR047565Alpha-macroglobulin-like, thiol-ester bond-forming regionConserved Site
B,
F [auth G]		IPR048848Complement component 3, CUB domain, second segmentDomain
B,
F [auth G]		IPR018081Anaphylatoxin, complement systemHomologous Superfamily
B,
F [auth G]		IPR035815Complement C3-like, NTR domainDomain
B,
F [auth G]		IPR018933Netrin module, non-TIMP typeDomain
B,
F [auth G]		IPR001840Anaphylatoxin, complement system domainDomain
B,
F [auth G]		IPR041425Complement C3/4/5, macroglobulin domain MG1Domain
B,
F [auth G]		IPR011625Alpha-2-macroglobulin, bait region domainDomain
B,
F [auth G]		IPR001134Netrin domainDomain
B,
F [auth G]		IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldHomologous Superfamily
B,
F [auth G]		IPR011626Alpha-macroglobulin-like, TED domainDomain
B,
F [auth G]		IPR000020Anaphylatoxin/fibulinDomain
B,
F [auth G]		IPR036595Alpha-macroglobulin, receptor-binding domain superfamilyHomologous Superfamily
B,
F [auth G]		IPR002890Macroglobulin domainDomain
B,
F [auth G]		IPR013783Immunoglobulin-like foldHomologous Superfamily
B,
F [auth G]		IPR050473Alpha-2-macroglobulin/Complement systemFamily
B,
F [auth G]		IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidHomologous Superfamily
B,
F [auth G]		IPR040839Macroglobulin domain MG4Domain
A,
E [auth F]		IPR019742Alpha-2-macroglobulin, conserved siteConserved Site
A,
E [auth F]		IPR009048Alpha-macroglobulin, receptor-bindingDomain
A,
E [auth F]		IPR041555Macroglobulin domain MG3Domain
A,
E [auth F]		IPR049466Complement component 3, CUB domain, first segmentDomain
A,
E [auth F]		IPR001599Alpha-2-macroglobulinDomain
A,
E [auth F]		IPR047565Alpha-macroglobulin-like, thiol-ester bond-forming regionConserved Site
A,
E [auth F]		IPR048848Complement component 3, CUB domain, second segmentDomain
A,
E [auth F]		IPR018081Anaphylatoxin, complement systemHomologous Superfamily
A,
E [auth F]		IPR035815Complement C3-like, NTR domainDomain
A,
E [auth F]		IPR018933Netrin module, non-TIMP typeDomain
A,
E [auth F]		IPR001840Anaphylatoxin, complement system domainDomain
A,
E [auth F]		IPR041425Complement C3/4/5, macroglobulin domain MG1Domain
A,
E [auth F]		IPR011625Alpha-2-macroglobulin, bait region domainDomain
A,
E [auth F]		IPR001134Netrin domainDomain
A,
E [auth F]		IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldHomologous Superfamily
A,
E [auth F]		IPR011626Alpha-macroglobulin-like, TED domainDomain
A,
E [auth F]		IPR000020Anaphylatoxin/fibulinDomain
A,
E [auth F]		IPR036595Alpha-macroglobulin, receptor-binding domain superfamilyHomologous Superfamily
A,
E [auth F]		IPR002890Macroglobulin domainDomain
A,
E [auth F]		IPR013783Immunoglobulin-like foldHomologous Superfamily
A,
E [auth F]		IPR050473Alpha-2-macroglobulin/Complement systemFamily
A,
E [auth F]		IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidHomologous Superfamily
A,
E [auth F]		IPR040839Macroglobulin domain MG4Domain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
D,
H [auth I]		Pharos:  P00751