3HDS | pdb_00003hds

Crystal structure of 4-methylmuconolactone methylisomerase in complex with MES

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd3hdsd1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel MmlI-like automated matches (Pseudomonas reinekei ) [TaxId: 395598 ], SCOPe (2.08)
Dd3hdsd2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas reinekei ) [TaxId: 395598 ], SCOPe (2.08)
Cd3hdsc1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel MmlI-like automated matches (Pseudomonas reinekei ) [TaxId: 395598 ], SCOPe (2.08)
Cd3hdsc2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas reinekei ) [TaxId: 395598 ], SCOPe (2.08)
Bd3hdsb1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel MmlI-like automated matches (Pseudomonas reinekei ) [TaxId: 395598 ], SCOPe (2.08)
Bd3hdsb2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas reinekei ) [TaxId: 395598 ], SCOPe (2.08)
Ad3hdsa1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel MmlI-like automated matches (Pseudomonas reinekei ) [TaxId: 395598 ], SCOPe (2.08)
Ad3hdsa2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas reinekei ) [TaxId: 395598 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyDimeric alpha+beta barrel 8085472 3000089 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyDimeric alpha+beta barrel 8085472 3000089 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyDimeric alpha+beta barrel 8085472 3000089 SCOP2B (2022-06-29)
ASCOP2 FamilyMmlI-like 8085471 4001913 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyDimeric alpha+beta barrel 8085472 3000089 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DMmlIe3hdsD1 A: a+b two layersX: Alpha-beta plaitsH: Dimeric alpha+beta barrel (From Topology)T: Dimeric alpha+beta barrelF: MmlIECOD (1.6)
CMmlIe3hdsC1 A: a+b two layersX: Alpha-beta plaitsH: Dimeric alpha+beta barrel (From Topology)T: Dimeric alpha+beta barrelF: MmlIECOD (1.6)
BMmlIe3hdsB1 A: a+b two layersX: Alpha-beta plaitsH: Dimeric alpha+beta barrel (From Topology)T: Dimeric alpha+beta barrelF: MmlIECOD (1.6)
AMmlIe3hdsA1 A: a+b two layersX: Alpha-beta plaitsH: Dimeric alpha+beta barrel (From Topology)T: Dimeric alpha+beta barrelF: MmlIECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.2.0)
C3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.2.0)
B3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.2.0)
A3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E, F
short peptide ASWSA---
A, B, C, D
4-methylmuconolactone methylisomerase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR0185664-Methylmuconolactone methyl-isomeraseDomain
A, B, C, D
IPR011008Dimeric alpha-beta barrelHomologous Superfamily