Crystal structure of AraC family transcriptional regulator from Pseudomonas putida
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | DZF_C | e3graA2 | A: alpha bundles | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: DZF_C | ECOD (develop294) |
| B | RdRP_3 | e3graB1 | A: alpha bundles | X: HTH | H: Nudix | T: Nudix | F: RdRP_3 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.50.880 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Class I glutamine amidotransferase (GATase) domain | CATH (4.3.0) |
| B | 3.40.50.880 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Class I glutamine amidotransferase (GATase) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01965 | DJ-1/PfpI family (DJ-1_PfpI) | DJ-1/PfpI family | The family includes the protease PfpI Swiss:Q51732 [1]. This domain is also found in transcriptional regulators such as Swiss:Q9RJG8. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Transcriptional regulator, AraC family | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029062 | Class I glutamine amidotransferase-like | Homologous Superfamily | |
| IPR002818 | DJ-1/PfpI | Domain | |
| IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
| IPR018060 | AraC-like, DNA binding HTH domain | Domain | |
| IPR052158 | Isonitrile Hydratase and Quaternary Amine Regulator | Family | |
| IPR018062 | HTH domain AraC-type, conserved site | Conserved Site |














