Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd3gcfd1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Dd3gcfd2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Ed3gcfe1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Ed3gcfe2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Ld3gcfl1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Ld3gcfl2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Md3gcfm1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Md3gcfm2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Nd3gcfn1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Nd3gcfn2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Ad3gcfa1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Ad3gcfa2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Bd3gcfb1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Bd3gcfb2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Cd3gcfc1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Cd3gcfc2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Fd3gcff1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Fd3gcff2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Gd3gcfg1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Gd3gcfg2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Hd3gcfh1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Hd3gcfh2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Id3gcfi1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Id3gcfi2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Jd3gcfj1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Jd3gcfj2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Kd3gcfk1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Kd3gcfk2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Od3gcfo1 All beta proteins ISP domain ISP domain automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)
Od3gcfo2 Alpha and beta proteins (a+b) TBP-like Bet v1-like automated matches automated matches (Nocardioides aromaticivorans ) [TaxId: 200618 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DF_UNCLASSIFIEDe3gcfD2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
DPF11723e3gcfD1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
DPF00355e3gcfD3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
EF_UNCLASSIFIEDe3gcfE3 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
EPF11723e3gcfE1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
EPF00355e3gcfE2 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
LF_UNCLASSIFIEDe3gcfL3 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
LPF11723e3gcfL1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
LPF00355e3gcfL2 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
MF_UNCLASSIFIEDe3gcfM2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
MPF11723e3gcfM3 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
MPF00355e3gcfM1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
NF_UNCLASSIFIEDe3gcfN1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
NPF11723e3gcfN2 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
NPF00355e3gcfN3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
AF_UNCLASSIFIEDe3gcfA2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
APF11723e3gcfA3 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
APF00355e3gcfA1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
BF_UNCLASSIFIEDe3gcfB2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
BPF11723e3gcfB1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
BPF00355e3gcfB3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
CF_UNCLASSIFIEDe3gcfC1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
CPF11723e3gcfC3 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
CPF00355e3gcfC2 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
FF_UNCLASSIFIEDe3gcfF3 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
FPF11723e3gcfF2 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
FPF00355e3gcfF1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
GF_UNCLASSIFIEDe3gcfG2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
GPF11723e3gcfG1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
GPF00355e3gcfG3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
HF_UNCLASSIFIEDe3gcfH2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
HPF11723e3gcfH3 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
HPF00355e3gcfH1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
IF_UNCLASSIFIEDe3gcfI1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
IPF11723e3gcfI2 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
IPF00355e3gcfI3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
JF_UNCLASSIFIEDe3gcfJ1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
JPF11723e3gcfJ2 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
JPF00355e3gcfJ3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
KF_UNCLASSIFIEDe3gcfK1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
KPF11723e3gcfK3 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
KPF00355e3gcfK2 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)
OF_UNCLASSIFIEDe3gcfO2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: F_UNCLASSIFIEDECOD (1.6)
OPF11723e3gcfO3 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: PF11723ECOD (1.6)
OPF00355e3gcfO1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: PF00355ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
D2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
D2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
E3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
E2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
E2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
L3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
L2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
L2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
M3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
M2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
M2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
N3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
N2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
N2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
A3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
A2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
A2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
B3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
B2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
B2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
C3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
C2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
C2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
F3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
F2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
F2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
G3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
G2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
G2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
H3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
H2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
H2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
I3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
I2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
I2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
J3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
J2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
J2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
K3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
K2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
K2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
O3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (4.3.0)
O2.20.25.680 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
O2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF11723Homotrimeric ring hydroxylase (Aromatic_hydrox)Homotrimeric ring hydroxylaseThis domain is found on aromatic hydroxylating enzymes such as 2-oxo-1,2-dihydroquinoline 8-monooxygenase from Pseudomonas putida and carbazole 1,9a-dioxygenase from Janthinobacterium. These enzymes are homotrimers and are distantly related to the ty ...This domain is found on aromatic hydroxylating enzymes such as 2-oxo-1,2-dihydroquinoline 8-monooxygenase from Pseudomonas putida and carbazole 1,9a-dioxygenase from Janthinobacterium. These enzymes are homotrimers and are distantly related to the typical oxygenase [2]. This domain is found C terminal to the Rieske domain which binds an iron-sulphur cluster.
Domain
A, B, C, D, E
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
A, B, C, D, E
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR021028Homotrimeric ring hydroxylase, catalytic domainDomain