3F9R | pdb_00003f9r

Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d3f9rb1	Alpha and beta proteins (a/b)	HAD-like	HAD-like	automated matches	automated matches	(Trypanosoma brucei ) [TaxId: 5691 ],	SCOPe (2.08)
B	d3f9rb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Trypanosoma brucei ) [TaxId: 5691 ],	SCOPe (2.08)
A	d3f9ra1	Alpha and beta proteins (a/b)	HAD-like	HAD-like	automated matches	automated matches	(Trypanosoma brucei ) [TaxId: 5691 ],	SCOPe (2.08)
A	d3f9ra2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Trypanosoma brucei ) [TaxId: 5691 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	HAD-like	8062655	3001890	SCOP2B (2022-06-29)
A	SCOP2 Family	Predicted hydrolases Cof	8062654	4002994	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	HAD-like	8062655	3001890	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e3f9rB1	A: P-loop domains-like	X: P-loop domains-related	H: P-loop containing nucleoside triphosphate hydrolases	T: ORC2	F:	ECOD (20:10:01)
A		e3f9rA1	A: P-loop domains-like	X: P-loop domains-related	H: P-loop containing nucleoside triphosphate hydrolases	T: ORC2	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.1000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	HAD superfamily/HAD-like	CATH (4.3.0)
B	3.30.1240.20	Alpha Beta	2-Layer Sandwich	Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase	Chain: A	CATH (4.3.0)
A	3.40.50.1000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	HAD superfamily/HAD-like	CATH (4.3.0)
A	3.30.1240.20	Alpha Beta	2-Layer Sandwich	Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase	Chain: A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03332	Eukaryotic phosphomannomutase (PMM)	Eukaryotic phosphomannomutase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Phosphomannomutase	isomerase activity intramolecular phosphotransferase activity catalytic activity phosphomannomutase activity intramolecular transferase activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process primary metabolic process glycoprotein metabolic process protein N-linked glycosylation macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process monosaccharide metabolic process carbohydrate metabolic process carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process primary metabolic process glycoprotein metabolic process protein N-linked glycosylation macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process monosaccharide metabolic process carbohydrate metabolic process small molecule biosynthetic process carbohydrate biosynthetic process mannose metabolic process hexose metabolic process monosaccharide biosynthetic process hexose biosynthetic process mannose biosynthetic process small molecule metabolic process nucleoside phosphate metabolic process nucleotide-sugar metabolic process nucleobase-containing compound biosynthetic process nucleobase-containing compound metabolic process organophosphate metabolic process organophosphate biosynthetic process nucleobase-containing small molecule metabolic process nucleoside phosphate biosynthetic process phosphate-containing compound metabolic process GDP-mannose biosynthetic process nucleotide-sugar biosynthetic process phosphorus metabolic process GDP-mannose metabolic process	membrane-bounded organelle cell projection cellular anatomical structure intracellular anatomical structure ciliary plasm organelle cilium cytoplasm plasma membrane bounded cell projection cytosol intracellular organelle peroxisome microbody glycosome membrane-bounded organelle cell projection cellular anatomical structure intracellular anatomical structure ciliary plasm organelle cilium cytoplasm plasma membrane bounded cell projection cytosol intracellular organelle peroxisome microbody glycosome intracellular membrane-bounded organelle nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR023214	HAD superfamily	Homologous Superfamily
A, B	IPR005002	Phosphomannomutase	Family
A, B	IPR036412	HAD-like superfamily	Homologous Superfamily
A, B	IPR006379	HAD-superfamily hydrolase, subfamily IIB	Family
A, B	IPR043169	Phosphomannomutase, cap domain	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.