3EF2

Structure of the Marasmius oreades mushroom lectin (MOA) in complex with Galalpha(1,3)[Fucalpha(1,2)]Gal and Calcium.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3ef2a1	All beta proteins	beta-Trefoil	Ricin B-like lectins	Ricin B-like	Agglutinin MOA, N-terminal domain	(Marasmius oreades ) [TaxId: 181124 ],	SCOPe (2.08)
A	d3ef2a2	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	MOA C-terminal domain-like	Agglutinin MOA	(Marasmius oreades ) [TaxId: 181124 ],	SCOPe (2.08)
B	d3ef2b1	All beta proteins	beta-Trefoil	Ricin B-like lectins	Ricin B-like	Agglutinin MOA, N-terminal domain	(Marasmius oreades ) [TaxId: 181124 ],	SCOPe (2.08)
B	d3ef2b2	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	MOA C-terminal domain-like	Agglutinin MOA	(Marasmius oreades ) [TaxId: 181124 ],	SCOPe (2.08)
C	d3ef2c1	All beta proteins	beta-Trefoil	Ricin B-like lectins	Ricin B-like	Agglutinin MOA, N-terminal domain	(Marasmius oreades ) [TaxId: 181124 ],	SCOPe (2.08)
C	d3ef2c2	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	MOA C-terminal domain-like	Agglutinin MOA	(Marasmius oreades ) [TaxId: 181124 ],	SCOPe (2.08)
D	d3ef2d1	All beta proteins	beta-Trefoil	Ricin B-like lectins	Ricin B-like	Agglutinin MOA, N-terminal domain	(Marasmius oreades ) [TaxId: 181124 ],	SCOPe (2.08)
D	d3ef2d2	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	MOA C-terminal domain-like	Agglutinin MOA	(Marasmius oreades ) [TaxId: 181124 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Ricin B-like lectins	8034519	3000678	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Cysteine proteinases	8034520	3001808	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ricin B-like lectins	8034519	3000678	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Cysteine proteinases	8034520	3001808	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ricin B-like lectins	8034519	3000678	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Cysteine proteinases	8034520	3001808	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Cysteine proteinases	8034520	3001808	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ricin B-like lectins	8034519	3000678	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF14200	e3ef2A1	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: PF14200	ECOD (1.6)
A	PF18021	e3ef2A2	A: a+b complex topology	X: Cysteine proteinases-like	H: Cysteine proteinases (From Topology)	T: Cysteine proteinases	F: PF18021	ECOD (1.6)
B	PF14200	e3ef2B1	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: PF14200	ECOD (1.6)
B	PF18021	e3ef2B2	A: a+b complex topology	X: Cysteine proteinases-like	H: Cysteine proteinases (From Topology)	T: Cysteine proteinases	F: PF18021	ECOD (1.6)
C	PF14200	e3ef2C1	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: PF14200	ECOD (1.6)
C	PF18021	e3ef2C2	A: a+b complex topology	X: Cysteine proteinases-like	H: Cysteine proteinases (From Topology)	T: Cysteine proteinases	F: PF18021	ECOD (1.6)
D	PF14200	e3ef2D1	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: PF14200	ECOD (1.6)
D	PF18021	e3ef2D2	A: a+b complex topology	X: Cysteine proteinases-like	H: Cysteine proteinases (From Topology)	T: Cysteine proteinases	F: PF18021	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (4.3.0)
A	3.30.460.70	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
B	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (4.3.0)
B	3.30.460.70	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
C	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (4.3.0)
C	3.30.460.70	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
D	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (4.3.0)
D	3.30.460.70	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF18021	Agglutinin C-terminal (Agglutinin_C)	Agglutinin C-terminal	This is the C-terminal domain of the alpha chain found in Marasmius Oreades lectin protein (MOA) which binds specifically with Gal.alpha(1,3)Gal-containing sugar epitopes. The enzymatic activity of the MOA may be associated with this domain. The doma ...	This is the C-terminal domain of the alpha chain found in Marasmius Oreades lectin protein (MOA) which binds specifically with Gal.alpha(1,3)Gal-containing sugar epitopes. The enzymatic activity of the MOA may be associated with this domain. The domain has an alpha/beta-fold, which features a central six-stranded, mostly anti-parallel, beta-sheet flanked by three alpha-helices, and a short two-stranded beta-sheet [1].	Domain
A, B, C, D	PF14200	Ricin-type beta-trefoil lectin domain-like (RicinB_lectin_2)	Ricin-type beta-trefoil lectin domain-like	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Agglutinin	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
A, B, C, D	IPR035992	Ricin B-like lectins	Homologous Superfamily
A, B, C, D	IPR040600	Agglutinin, C-terminal	Domain
A, B, C, D	IPR000772	Ricin B, lectin domain	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D	OCS	Parent Component: CYS RESID: AA0556 PSI-MOD : L-cysteic acid (L-cysteine sulfonic acid) MOD:00460

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.