3DZM | pdb_00003dzm

Crystal structure of a major outer membrane protein from Thermus thermophilus HB27

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CIL7e3dzmC1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: IL7ECOD (v294.1)
BIL7e3dzmB1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: IL7ECOD (v294.1)
Ae3dzmA1 A: a/b three-layered sandwichesX: Ribonuclease H-likeH: TIM barrelsT: TIM barrelsF:ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.40.160.70 Mainly Beta Beta Barrel Porin outer membrane protein from Thermus thermophilus HB27.CATH (4.3.0)
B2.40.160.70 Mainly Beta Beta Barrel Porin outer membrane protein from Thermus thermophilus HB27.CATH (4.3.0)
A2.40.160.70 Mainly Beta Beta Barrel Porin outer membrane protein from Thermus thermophilus HB27.CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Hypothetical conserved protein - -

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C
OPMTransmembraneBeta-barrel transmembraneMajor OMP (n=8,S=10)Major OMP from thermophilic eubacteria

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B, C
mpstrucTRANSMEMBRANE PROTEINS: BETA-BARRELBeta-Barrel Membrane Proteins: Monomeric/DimericTtoA Outer Membrane Protein (OMP)