3DZA

Crystal structure of a putative membrane protein of unknown function (yfdx) from klebsiella pneumoniae subsp. at 1.65 A resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyYfdX-like8092291 3002576 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyYfdX-like8092291 3002576 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyYfdX-like8092291 3002576 SCOP2B (2022-06-29)
BSCOP2 FamilyYfdX-like8045834 4004712 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyYfdX-like8092291 3002576 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CPF10938e3dzaC1 A: alpha bundlesX: uncharacterized putative membrane protein yfdX (From Topology)H: uncharacterized putative membrane protein yfdX (From Topology)T: uncharacterized putative membrane protein yfdXF: PF10938ECOD (1.6)
DPF10938e3dzaD1 A: alpha bundlesX: uncharacterized putative membrane protein yfdX (From Topology)H: uncharacterized putative membrane protein yfdX (From Topology)T: uncharacterized putative membrane protein yfdXF: PF10938ECOD (1.6)
APF10938e3dzaA1 A: alpha bundlesX: uncharacterized putative membrane protein yfdX (From Topology)H: uncharacterized putative membrane protein yfdX (From Topology)T: uncharacterized putative membrane protein yfdXF: PF10938ECOD (1.6)
BPF10938e3dzaB1 A: alpha bundlesX: uncharacterized putative membrane protein yfdX (From Topology)H: uncharacterized putative membrane protein yfdX (From Topology)T: uncharacterized putative membrane protein yfdXF: PF10938ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C1.20.120.1940 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) YfdX protein domainCATH (4.3.0)
C6.10.250.2140 Special Helix non-globular Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
D1.20.120.1940 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) YfdX protein domainCATH (4.3.0)
D6.10.250.2140 Special Helix non-globular Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
A1.20.120.1940 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) YfdX protein domainCATH (4.3.0)
A6.10.250.2140 Special Helix non-globular Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
B1.20.120.1940 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) YfdX protein domainCATH (4.3.0)
B6.10.250.2140 Special Helix non-globular Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF10938YfdX protein (YfdX)YfdX protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
uncharacterized putative membrane protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR021236Uncharacterised protein family YfdXFamily