3DKX | pdb_00003dkx

Crystal Structure of the replication initiator protein encoded on plasmid pMV158 (RepB), trigonal form, to 2.7 Ang resolution

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CRibosomal_L36e3dkxC1 A: a/b three-layered sandwichesX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: Ribosomal_L36ECOD (v294.1)
BRibosomal_L36e3dkxB1 A: a/b three-layered sandwichesX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: Ribosomal_L36ECOD (v294.1)
APLDc_2e3dkxA1 A: a/b three-layered sandwichesX: TIM beta/alpha-barrelH: FAD-dependent thiol oxidaseT: FAD-dependent thiol oxidaseF: PLDc_2ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.40.1310.30 Alpha Beta 3-Layer(aba) Sandwich Replication Protein E1 Chain: A,CATH (4.3.0)
C1.10.10.1480 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Plasmid replication proteinCATH (4.3.0)
B3.40.1310.30 Alpha Beta 3-Layer(aba) Sandwich Replication Protein E1 Chain: A,CATH (4.3.0)
B1.10.10.1480 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Plasmid replication proteinCATH (4.3.0)
A3.40.1310.30 Alpha Beta 3-Layer(aba) Sandwich Replication Protein E1 Chain: A,CATH (4.3.0)
A1.10.10.1480 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Plasmid replication proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Replication protein repB

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR041919Plasmid replication protein, C-terminal domain superfamilyHomologous Superfamily
A, B, C
IPR002631Plasmid replication protein, origin binding domainDomain