3DKM
Crystal structure of the HECTD1 CPH domain
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3dkma1 | All beta proteins | SH3-like barrel | Mib/herc2 domain-like | Mib/herc2 domain | E3 ubiquitin-protein ligase hectd1 | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d3dkma2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Mib/herc2 domain-like | 8033772 | 3000237 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.40 | Mainly Beta | Roll | SH3 type barrels. | SH3 Domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06701 | Mib_herc2 (MIB_HERC2) | Mib_herc2 | Named "mib/herc2 domain" in [1]. Usually the protein also contains an E3 ligase domain (either Ring or Hect). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002110 | Ankyrin repeat | Repeat | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR000569 | HECT domain | Domain | |
IPR012919 | SUN domain | Domain | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR037252 | Mib/herc2 domain superfamily | Homologous Superfamily | |
IPR010606 | Mib-herc2 | Domain | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR035983 | HECT, E3 ligase catalytic domain | Homologous Superfamily | |
IPR011989 | Armadillo-like helical | Homologous Superfamily | |
IPR045322 | E3 ubiquitin-protein ligase HECTD1/TRIP12-like | Family | |
IPR041200 | FKBP3, basic tilted helix bundle domain | Domain |