3D8R | pdb_00003d8r

Thermus thermophilus Uroporphyrinogen III Synthase

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3d8ra1	Alpha and beta proteins (a/b)	HemD-like	HemD-like	HemD-like	automated matches	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
A	d3d8ra2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	HemD-like	8086157	4003361	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	HemD-like	8086158	3000689	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e3d8rA3	A: DEATH domain	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: CoV_NSP4_C	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.10090	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Uroporphyrinogen-III synthase	hydro-lyase activity uroporphyrinogen-III synthase activity lyase activity catalytic activity carbon-oxygen lyase activity	porphyrin-containing compound biosynthetic process tetrapyrrole metabolic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process uroporphyrinogen III metabolic process organic acid biosynthetic process organic acid metabolic process carboxylic acid biosynthetic process tetrapyrrole biosynthetic process biosynthetic process small molecule metabolic process metabolic process cellular process porphyrin-containing compound biosynthetic process tetrapyrrole metabolic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process uroporphyrinogen III metabolic process organic acid biosynthetic process organic acid metabolic process carboxylic acid biosynthetic process tetrapyrrole biosynthetic process biosynthetic process small molecule metabolic process metabolic process cellular process uroporphyrinogen III biosynthetic process porphyrin-containing compound metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	Homologous Superfamily
A	IPR039793	Uroporphyrinogen-III synthase	Family
A	IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.