3CAN | pdb_00003can

Crystal structure of a domain of pyruvate-formate lyase-activating enzyme from Bacteroides vulgatus ATCC 8482

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Pyruvate formate-lyase activating enzyme-like	8048602	4006158	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Radical SAM enzymes	8106662	3000308	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	NUDIX	e3canA1	A: a/b three-layered sandwiches	X: Ribonuclease H-like	H: HD-domain/PDEase-like	T: HD-domain/PDEase-like	F: NUDIX	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.80.30.10	Alpha Beta	Alpha-Beta Horseshoe	pyruvate-formate lyase- activating enzyme	pyruvate-formate lyase- activating enzyme	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Pyruvate-formate lyase-activating enzyme	lyase activity catalytic activity oxidoreductase activity [formate-C-acetyltransferase]-activating enzyme activity glycyl-radical enzyme activating activity iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding cation binding ion binding metal ion binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR007197	Radical SAM	Domain
A	IPR012839	Organic radical enzyme activase	Family
A	IPR040074	BssD/PflA/YjjW	Family
A	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Conserved Site
A	IPR034457	Organic radical-activating enzymes	Family
A	IPR001989	Radical-activating enzyme, conserved site	Conserved Site
A	IPR058240	Radical SAM superfamily	Homologous Superfamily
A	IPR034465	Pyruvate formate-lyase activase	Family
A	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.