Crystal Structure of FlgD from Xanthomonas campestris: Insights into the Hook Capping Essential for Flagellar Assembly
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | FlgD_ig | e3c12A1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: SAM/DNA-glycosylase | T: SAM domain-like | F: FlgD_ig | ECOD (v294.1) |
| A | FLgD_tudor | e3c12A2 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: SAM/DNA-glycosylase | T: SAM domain-like | F: FLgD_tudor | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.30.30.910 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
| A | 2.60.40.4070 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13860 | FlgD Ig-like domain (FlgD_ig) | FlgD Ig-like domain | This domain has an immunoglobulin like beta sandwich fold. It is found in the FlgD protein the flagellar hook capping protein. The structure for this domain shows that it is inserted within a TUDOR like beta barrel domain [1]. | Domain | |
| PF13861 | FlgD Tudor-like domain (FLgD_tudor) | FlgD Tudor-like domain | This domain has a tudor domain-like beta barrel fold. It is found in the FlgD protein the flagellar hook capping protein. The structure for this domain shows that it contains a nested Ig-like domain within it [1]. However in some firmicute proteins ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Flagellar protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR005648 | Flagellar hook capping protein | Family | |
| IPR025965 | FlgD/Vpr, Ig-like domain | Domain | |
| IPR025963 | FlgD Tudor-like domain | Domain |














