3BUU | pdb_00003buu

Crystal structure of LolA superfamily protein NE2245 from Nitrosomonas europaea

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	LolA-like	8092761	3001964	SCOP2B (2022-06-29)
A	SCOP2 Family	NE2245-like	8046499	4005118	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	LolA-like	8092761	3001964	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	LolA_like	e3buuB1	A: beta meanders	X: Lipoprotein localization factors LolAB	H: Lipoprotein localization factors LolAB (From Topology)	T: Lipoprotein localization factors LolAB	F: LolA_like	ECOD (1.6)
A	LolA_like	e3buuA1	A: beta meanders	X: Lipoprotein localization factors LolAB	H: Lipoprotein localization factors LolAB (From Topology)	T: Lipoprotein localization factors LolAB	F: LolA_like	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.50.20.10	Mainly Beta	Clam	outer membrane lipoprotein receptor (LolB), chain A	Lipoprotein localisation LolA/LolB/LppX	CATH (4.3.0)
A	2.50.20.10	Mainly Beta	Clam	outer membrane lipoprotein receptor (LolB), chain A	Lipoprotein localisation LolA/LolB/LppX	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF17131	Uncharacterized protein TP_0789 (TP_0789-like)	Uncharacterized protein TP_0789	This entry represents a domain found in the uncharacterized protein TP_0789 from Treponema pallidum and related proteins. This domain is found either standalone or in combination with other domains. It folds into an open beta-barrel which coils aroun ...	This entry represents a domain found in the uncharacterized protein TP_0789 from Treponema pallidum and related proteins. This domain is found either standalone or in combination with other domains. It folds into an open beta-barrel which coils around an alpha-helix buried in the barrel interior. It is related to known domains of prokaryotic lipoproteins and lipoprotein localization factors such as the Outer-membrane lipoproteins carrier protein LolA and Outer membrane lipoprotein receptor LolB.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR052944	Sporulation-related	Family
A, B	IPR029046	Lipoprotein localisation LolA/LolB/LppX	Homologous Superfamily
A, B	IPR033399	Uncharacterized protein TP_0789	Domain
A, B	IPR011220	Uncharacterised conserved protein UCP028205	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.