3BRM | pdb_00003brm

Crystal structure of the covalent complex between the Bacillus subtilis glutaminase YbgJ and 5-oxo-L-norleucine formed by reaction of the protein with 6-diazo-5-oxo-L-norleucine


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B Superfamilybeta-lactamase/transpeptidase-like 8032866 3001604 SCOP2B (2022-06-29)
ASCOP2B Superfamilybeta-lactamase/transpeptidase-like 8032866 3001604 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BIon_trans_2e3brmB1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: Rpp14/Pop5-likeT: Rpp14/Pop5-likeF: Ion_trans_2ECOD (v294.1)
BNIR_SIRe3brmB2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: NIR_SIRECOD (v294.1)
AIon_trans_2e3brmA1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: Rpp14/Pop5-likeT: Rpp14/Pop5-likeF: Ion_trans_2ECOD (v294.1)
ANIR_SIRe3brmA2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: NIR_SIRECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF04960Glutaminase (Glutaminase)GlutaminaseThis family of enzymes deaminates glutamine to glutamate EC:3.5.1.2. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR015868GlutaminaseFamily
A, B
IPR012338Beta-lactamase/transpeptidase-likeHomologous Superfamily