3BB9 | pdb_00003bb9

Crystal structure of a putative ketosteroid isomerase (sfri_1973) from shewanella frigidimarina ncimb 400 at 1.80 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d3bb9f_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	SO0125-like	Uncharacterized protein Sfri1973	(Shewanella frigidimarina NCIMB 400 ) [TaxId: 318167 ],	SCOPe (2.08)
E	d3bb9e_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	SO0125-like	Uncharacterized protein Sfri1973	(Shewanella frigidimarina NCIMB 400 ) [TaxId: 318167 ],	SCOPe (2.08)
D	d3bb9d_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	SO0125-like	Uncharacterized protein Sfri1973	(Shewanella frigidimarina NCIMB 400 ) [TaxId: 318167 ],	SCOPe (2.08)
C	d3bb9c_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	SO0125-like	Uncharacterized protein Sfri1973	(Shewanella frigidimarina NCIMB 400 ) [TaxId: 318167 ],	SCOPe (2.08)
B	d3bb9b_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	SO0125-like	Uncharacterized protein Sfri1973	(Shewanella frigidimarina NCIMB 400 ) [TaxId: 318167 ],	SCOPe (2.08)
A	d3bb9a1	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	SO0125-like	Uncharacterized protein Sfri1973	(Shewanella frigidimarina NCIMB 400 ) [TaxId: 318167 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	NTF2-like	8038951	3000472	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	NTF2-like	8038951	3000472	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	NTF2-like	8038951	3000472	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	NTF2-like	8038951	3000472	SCOP2B (2022-06-29)
B	SCOP2 Family	SO0125-like	8026572	4002749	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	NTF2-like	8038951	3000472	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	NTF2-like	8038951	3000472	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F		e3bb9F1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
E		e3bb9E1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
D		e3bb9D1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
C		e3bb9C1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
B		e3bb9B1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: DUF3197	F:	ECOD (20:10:01)
A		e3bb9A1	A: Cystatin-like	X: NTF2-like	H: NTF2-like	T: SnoaL_3	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
E	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
D	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
C	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
B	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
A	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF13474	SnoaL-like domain (SnoaL_3)	SnoaL-like domain	This family contains a large number of proteins that share the SnoaL fold.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR032710	NTF2-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR037401	SnoaL-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.