3B8N | pdb_00003b8n

Structure of FepE- Bacterial Polysaccharide Co-polymerase

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
I	d3b8ni_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
H	d3b8nh_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
G	d3b8ng_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
F	d3b8nf_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
E	d3b8ne_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
D	d3b8nd_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
C	d3b8nc_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
B	d3b8nb_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
A	d3b8na1	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Enterochelin transport protein FepE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
I	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038973	3000641	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I	GATase_2	e3b8nI1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)
H	GATase_2	e3b8nH1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)
G	GATase_2	e3b8nG1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)
F	GATase_2	e3b8nF1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)
E	GATase_2	e3b8nE1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)
D	GATase_2	e3b8nD1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)
C	GATase_2	e3b8nC1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)
B	GATase_2	e3b8nB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)
A	GATase_2	e3b8nA1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
I	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
I	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
H	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
H	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
G	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
G	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
F	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
F	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
E	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
E	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
D	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
D	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
C	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
C	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
B	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
B	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
A	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
A	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I	PF02706	Chain length determinant protein (Wzz)	Chain length determinant protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I	Ferric enterobactin (Enterochelin) transport	identical protein binding protein binding binding protein tyrosine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR050445	Bacterial polysaccharide biosynthesis and export	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR003856	Polysaccharide chain length determinant, N-terminal domain	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I	OPM	Transmembrane	Alpha-helical polytopic	LPS O-antigen chain length determinant protein	LPS O-antigen chain length determinant protein

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.