3B4Y

FGD1 (Rv0407) from Mycobacterium tuberculosis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3b4ya_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Bacterial luciferase-like	automated matches	automated matches	(Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ],	SCOPe (2.08)
B	d3b4yb_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Bacterial luciferase-like	automated matches	automated matches	(Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	F420 dependent oxidoreductases	8068096	4003322	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Bacterial luciferase-like	8068097	3000585	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Bacterial luciferase-like	8068097	3000585	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00296	e3b4yA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00296	ECOD (1.6)
B	PF00296	e3b4yB1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF00296	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.20.20.30	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Luciferase-like domain	CATH (4.3.0)
B	3.20.20.30	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Luciferase-like domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00296	Luciferase-like monooxygenase (Bac_luciferase)	Luciferase-like monooxygenase	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	PROBABLE F420-DEPENDENT GLUCOSE-6-PHOSPHATE DEHYDROGENASE FGD1	oxidoreductase activity glucose-6-phosphate dehydrogenase (coenzyme F420) activity oxidoreductase activity, acting on CH-OH group of donors catalytic activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen organic acid binding binding ion binding organic cyclic compound binding anion binding coenzyme F420 binding carboxylic acid binding heterocyclic compound binding carbohydrate derivative binding oxidoreductase activity glucose-6-phosphate dehydrogenase (coenzyme F420) activity oxidoreductase activity, acting on CH-OH group of donors catalytic activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen organic acid binding binding ion binding organic cyclic compound binding anion binding coenzyme F420 binding carboxylic acid binding heterocyclic compound binding carbohydrate derivative binding small molecule binding	carbohydrate metabolic process organic substance metabolic process primary metabolic process metabolic process cell redox homeostasis cellular homeostasis homeostatic process	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol cell periphery plasma membrane membrane external encapsulating structure cell wall peptidoglycan-based cell wall

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR011251	Luciferase-like domain	Domain
A, B	IPR019945	F420-dependent glucose-6-phosphate dehydrogenase-related	Family
A, B	IPR019944	F420-dependent glucose-6-phosphate dehydrogenase	Family
A, B	IPR036661	Luciferase-like domain superfamily	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B	CSO	Parent Component: CYS RESID: AA0205 PSI-MOD : L-cysteine sulfenic acid MOD:00210
A, B	MSE	Parent Component: MET RESID: AA0205

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.