3B0F
Crystal structure of the UBA domain of p62 and its interaction with ubiquitin
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3b0fb_ | All alpha proteins | RuvA C-terminal domain-like | UBA-like | UBA domain | automated matches | mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d3b0fa_ | All alpha proteins | RuvA C-terminal domain-like | UBA-like | UBA domain | automated matches | mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF16577 | e3b0fB1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: PF16577 | ECOD (1.6) |
A | PF16577 | e3b0fA1 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: PF16577 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16577 | UBA domain (UBA_5) | UBA domain | UBA_2 is a domain found on eukaryotic ubiquitin-interacting proteins. Sequestosome 1/p62 has recently been shown to interact with polyubiquitinated proteins through its UBA domain [1]. This domain selectively binds K63-polyubiquitinated proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR043145 | Zinc finger, ZZ-type superfamily | Homologous Superfamily | |
IPR000433 | Zinc finger, ZZ-type | Domain | |
IPR033741 | Sequestosome-1, UBA domain | Domain | |
IPR009060 | UBA-like superfamily | Homologous Superfamily | |
IPR000270 | PB1 domain | Domain | |
IPR015940 | Ubiquitin-associated domain | Domain | |
IPR034866 | Sequestosome-1, PB1 domain | Domain |