3A6R | pdb_00003a6r

E13Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd3a6rd_ All beta proteins Split barrel-like FMN-binding split barrel PNP-oxidase like FMN-binding protein (Nitratidesulfovibrio vulgaris str. 'Miyazaki F ) [TaxId: 883 ], SCOPe (2.08)
Cd3a6rc_ All beta proteins Split barrel-like FMN-binding split barrel PNP-oxidase like FMN-binding protein (Nitratidesulfovibrio vulgaris str. 'Miyazaki F ) [TaxId: 883 ], SCOPe (2.08)
Bd3a6rb_ All beta proteins Split barrel-like FMN-binding split barrel PNP-oxidase like FMN-binding protein (Nitratidesulfovibrio vulgaris str. 'Miyazaki F ) [TaxId: 883 ], SCOPe (2.08)
Ad3a6ra_ All beta proteins Split barrel-like FMN-binding split barrel PNP-oxidase like FMN-binding protein (Nitratidesulfovibrio vulgaris str. 'Miyazaki F ) [TaxId: 883 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyFMN-binding split barrel 8042078 3000856 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFMN-binding split barrel 8042078 3000856 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFMN-binding split barrel 8042078 3000856 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFMN-binding split barrel 8042078 3000856 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPutative_PNPOx_1e3a6rD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Putative_PNPOx_1ECOD (1.6)
CPutative_PNPOx_1e3a6rC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Putative_PNPOx_1ECOD (1.6)
BPutative_PNPOx_1e3a6rB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Putative_PNPOx_1ECOD (1.6)
APutative_PNPOx_1e3a6rA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Putative_PNPOx_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.30.110.10 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
C2.30.110.10 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
B2.30.110.10 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
A2.30.110.10 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
FMN-binding protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR012349FMN-binding split barrelHomologous Superfamily
A, B, C, D
IPR011576Pyridoxamine 5'-phosphate oxidase, N-terminalDomain