Crystal structure of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | CBM_4_9_like_1 | e2zxqA5 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: CBM_4_9_like_1 | ECOD (1.6) |
| A | CBM_4_9_like | e2zxqA6 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: CBM_4_9_like | ECOD (1.6) |
| A | Glyco_hyd_101C | e2zxqA4 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: Glyco_hyd_101C | ECOD (1.6) |
| A | EUF07817 | e2zxqA2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: EUF07817 | ECOD (1.6) |
| A | EUF08133 | e2zxqA1 | A: alpha bundles | X: Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase (From Topology) | H: Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase (From Topology) | T: Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase | F: EUF08133 | ECOD (1.6) |
| A | Glyco_hydro_101 | e2zxqA3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_101 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.70.98.10 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.2.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.2.0) |
| A | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.2.0) |
| A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.2.0) |
| A | 1.20.1270.70 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (4.2.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Endo-alpha-N-acetylgalactosaminidase |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR040502 | Endo-alpha-N-acetylgalactosaminidase, domain 6 | Domain | |
| IPR040633 | Galactose mutarotase-like fold domain | Domain | |
| IPR035364 | Glycosyl hydrolase 101, beta-sandwich domain | Domain | |
| IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
| IPR048842 | Endo-alpha-N-acetylgalactosaminidase-like, helical bundle domain | Domain | |
| IPR008969 | Carboxypeptidase-like, regulatory domain superfamily | Homologous Superfamily | |
| IPR040575 | Endo-alpha-N-acetylgalactosaminidase, N-terminal | Domain | |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
| IPR000421 | Coagulation factor 5/8, C-terminal domain | Domain | |
| IPR025706 | Endo-alpha-N-acetylgalactosaminidase | Domain | |
| IPR014718 | Glycoside hydrolase-type carbohydrate-binding | Homologous Superfamily | |
| IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
| IPR049314 | Endo-alpha-N-acetylgalactosaminidase, domain 5 | Domain |
