2YYB

Crystal structure of TTHA1606 from Thermus thermophilus HB8

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2yyba_ Alpha and beta proteins (a/b) NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like automated matches automated matches (Thermus thermophilus HB8 ) [TaxId: 300852 ], SCOPe (2.08)
Bd2yybb_ Alpha and beta proteins (a/b) NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like automated matches automated matches (Thermus thermophilus HB8 ) [TaxId: 300852 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyNIF3-like8076250 4001220 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNIF3-like8076251 3001101 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyNIF3-like8076251 3001101 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF01784e2yybA2 A: a/b three-layered sandwichesX: NIF3 (NGG1p interacting factor 3)-like (From Topology)H: NIF3 (NGG1p interacting factor 3)-like (From Topology)T: NIF3 (NGG1p interacting factor 3)-likeF: PF01784ECOD (1.6)
BPF01784e2yybB1 A: a/b three-layered sandwichesX: NIF3 (NGG1p interacting factor 3)-like (From Topology)H: NIF3 (NGG1p interacting factor 3)-like (From Topology)T: NIF3 (NGG1p interacting factor 3)-likeF: PF01784ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.1390.30 Alpha Beta 3-Layer(aba) Sandwich Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase Chain: A, domain 1CATH (4.3.0)
B3.40.1390.30 Alpha Beta 3-Layer(aba) Sandwich Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase Chain: A, domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01784Duf34/NIF3 (NGG1p interacting factor 3) (DUF34_NIF3)Duf34/NIF3 (NGG1p interacting factor 3)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Hypothetical protein TTHA1606 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR002678DUF34/NIF3Family
A, B
IPR036069DUF34/NIF3 superfamilyHomologous Superfamily